CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh2_kg.2__267__AT1G61980.1
(
Arabidopsis lyrata
)
mTERF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02536 (mTERF)
IPR003690
fgenesh2_kg.2__267__AT1G61980.1
T262693_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh2_kg.2__267__AT1G61980.1
mTERF
88
300
LNLFRSHGFTDSQISSIVTDYPQLLIADAEKSLGPKLQFLQSREASSSELTEIVSQVPKILGKRGHKTISVYYDFIKDTLLHDKSSKKEKSCHSFPQGNLENKIRNISVLRELGMPHKLLFPLLISCDVPVFGKEKFEESLKKVVDMGFDPTSAKFLEALRVVQRLSDKTIEEKVNAYERLGFDVGNVWAVFKRWPNFLTHSEKKILSTIETF
fgenesh2_kg.2__267__AT1G61980.1
mTERF
283
396
PNFLTHSEKKILSTIETFLGLGFTRDEFSMLVKRFPQGIGLSPETVKKKTEFLVKKMNWPIKALVSNPAILGYSMEKRTVPRGNVIKALISKGLIGSELPSISHVFICTNQVFL
Links
Other
mTERF
family TFs
Other
Arabidopsis lyrata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bostr.22157s0161
Boechera stricta
Bostr.22157s0161
N
0.872
AT1G61980
Arabidopsis thaliana
AT1G61980
N
0.850
Bostr.22157s0166
Boechera stricta
Bostr.22157s0166
N
0.833
Cagra.0043s0012
Capsella grandiflora
Cagra.0043s0012
N
0.816
Carubv10021598m.g
Capsella rubella
Carubv10021598m.g
N
0.805
AT1G61970
Arabidopsis thaliana
AT1G61970
N
0.744
Bostr.22157s0162
Boechera stricta
Bostr.22157s0162
N
0.720
Carubv10021445m.g
Capsella rubella
Carubv10021445m.g
N
0.703