CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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A1O7_08749
(
Cladophialophora yegresii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
A1O7_08749
T358823_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08658
M02628_2.00
Neurospora crassa
NYCGGBWAN
NTWVCCGRN
PBM
Weirauch et al.(2014)
pTH7896
0.601
0.743
ANIA_00202
M01349_2.00
Aspergillus nidulans
HBCGGNWWN
NWWNCCGVD
PBM
Lambert et al.(2019)
pEX0397
0.547
0.686
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.543
0.457
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EXJ55819
Zinc cluster
46
80
TGCLTCRERHLKCDEGLPNCQNCKKSNRKCKRGIR
Links
Other
Zinc cluster
family TFs
Other
Cladophialophora yegresii
TFs
180 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PDK_20s1464821g001
Phoenix dactylifera
PDK_20s1464821g001
I
AMTR_s00009p00242790
Amborella trichopoda
AMTR_s00009p00242790
I
PGSC0003DMG402030621
Solanum tuberosum
PGSC0003DMG402030621
I
POPTR_0006s13790
Populus trichocarpa
POPTR_0006s13790
I
Sb06g025040
Sorghum bicolor
Sb06g025040
I
Sb06g025060
Sorghum bicolor
Sb06g025060
I
Si000845m.g
Setaria italica
Si000845m.g
I
Si012401m.g
Setaria italica
Si012401m.g
I
TCM_037645
Theobroma cacao
TCM_037645
I
LPERR04G17400
Leersia perrieri
LPERR04G17400
I
GSMUA_Achr9G18080_001
Musa acuminata
GSMUA_Achr9G18080_001
I
GSMUA_Achr3G10120_001
Musa acuminata
GSMUA_Achr3G10120_001
I
GSMUA_Achr11G21270_001
Musa acuminata
GSMUA_Achr11G21270_001
I
GLYMA03G30940
Glycine max
GLYMA03G30940
I
SapurV1A.0249s0140
Salix purpurea
SapurV1A.0249s0140
I
29739.m003684
Ricinus communis
29739.m003684
I
GRMZM2G172795
Zea mays
GRMZM2G172795
I
F775_14190
Aegilops tauschii
F775_14190
I
F775_11347
Aegilops tauschii
F775_11347
I
cassava8594.m1
Manihot esculenta
cassava8594.m1
I
Gorai.001G012400
Gossypium raimondii
Gorai.001G012400
I
ORUFI04G22910
Oryza rufipogon
ORUFI04G22910
N
Pavir.J34298
Panicum virgatum
Pavir.J34298
N
ORUFI04G22890
Oryza rufipogon
ORUFI04G22890
N
ORGLA11G0077500
Oryza glaberrima
ORGLA11G0077500
N
ORGLA04G0183900
Oryza glaberrima
ORGLA04G0183900
N
ORGLA04G0183800
Oryza glaberrima
ORGLA04G0183800
N
OMERI01G18770
Oryza meridionalis
OMERI01G18770
N
OPUNC04G19040
Oryza punctata
OPUNC04G19040
N
OPUNC04G19030
Oryza punctata
OPUNC04G19030
N
ONIVA04G19860
Oryza nivara
ONIVA04G19860
N
ONIVA04G19650
Oryza nivara
ONIVA04G19650
N
ORUFI11G09150
Oryza rufipogon
ORUFI11G09150
N
OS04G0557200
Oryza sativa
OS04G0557200
N
OS04G0557800
Oryza sativa
OS04G0557800
N
Sb06g025020
Sorghum bicolor
Sb06g025020
N
Pavir.Gb01093
Panicum virgatum
Pavir.Gb01093
N
Pavir.Cb00833
Panicum virgatum
Pavir.Cb00833
N
Traes_2AL_4F71A8FB4
Triticum aestivum
Traes_2AL_4F71A8FB4
N
Traes_2DL_099D4CA9B
Triticum aestivum
Traes_2DL_099D4CA9B
N
TRIUR3_18279
Triticum urartu
TRIUR3_18279
N
TRIUR3_35186
Triticum urartu
TRIUR3_35186
N
TRIUR3_26157
Triticum urartu
TRIUR3_26157
N
F775_18830
Aegilops tauschii
F775_18830
N
OB01G30110
Oryza brachyantha
OB01G30110
N
MLOC_38470
Hordeum vulgare
MLOC_38470
N
LPERR08G11070
Leersia perrieri
LPERR08G11070
N
LPERR04G17390
Leersia perrieri
LPERR04G17390
N
LPERR04G17380
Leersia perrieri
LPERR04G17380
N
GSMUA_Achr5G20600_001
Musa acuminata
GSMUA_Achr5G20600_001
N
GRMZM5G822829
Zea mays
GRMZM5G822829
N
F775_19744
Aegilops tauschii
F775_19744
N
OB02G27530
Oryza brachyantha
OB02G27530
N
F775_10624
Aegilops tauschii
F775_10624
N
BGIOSGA015472
Oryza indica
BGIOSGA015472
N
BGIOSGA014567
Oryza indica
BGIOSGA014567
N
BGIOSGA014566
Oryza indica
BGIOSGA014566
N
BGIOSGA014565
Oryza indica
BGIOSGA014565
N
BGIOSGA003821
Oryza indica
BGIOSGA003821
N
BGIOSGA003819
Oryza indica
BGIOSGA003819
N
OGLUM04G21260
Oryza glumaepatula
OGLUM04G21260
N
ONIVA01G22920
Oryza nivara
ONIVA01G22920
N
OMERI04G17820
Oryza meridionalis
OMERI04G17820
N
OMERI04G17790
Oryza meridionalis
OMERI04G17790
N
OMERI01G18860
Oryza meridionalis
OMERI01G18860
N
OLONG_016960
Oryza longistaminata
OLONG_016960
N
OLONG_016958
Oryza longistaminata
OLONG_016958
N
OLONG_009946
Oryza longistaminata
OLONG_009946
N
OGLUM04G21350
Oryza glumaepatula
OGLUM04G21350
N
ONIVA01G22980
Oryza nivara
ONIVA01G22980
N
OGLUM01G23970
Oryza glumaepatula
OGLUM01G23970
N
OBART04G21370
Oryza barthii
OBART04G21370
N
OBART04G21320
Oryza barthii
OBART04G21320
N
OBART01G20350
Oryza barthii
OBART01G20350
N
OB04G28390
Oryza brachyantha
OB04G28390
N
OB04G28380
Oryza brachyantha
OB04G28380
N
OB04G28350
Oryza brachyantha
OB04G28350
N