CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CAGL0K06985g
(
Candida glabrata
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
CAGL0K06985g
T362645_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERT1
M00077_2.00
Saccharomyces cerevisiae
NYCGGAAY
RTTCCGRN
PBM
Badis et al.(2008)
YBR239C_2158
0.556
0.821
ERT1
M01572_2.00
Saccharomyces cerevisiae
NNCGGARNN
NNYTCCGNN
PBM
Zhu et al.(2009)
Ybr239c
0.556
0.821
ERT1
M07504_2.00
Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0420.1
0.556
0.821
ERT1
M08646_2.00
Saccharomyces cerevisiae
DYCGGAAY
RTTCCGRH
Misc
DeBoer et al.(2011)
YBR239C_564
0.556
0.821
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CAG61488
Zinc cluster
66
106
VACVNCSRNHSSCEQKRPCSRCIKKGIANTCVDAPRKKKKY
Links
Other
Zinc cluster
family TFs
Other
Candida glabrata
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ERT1
Saccharomyces cerevisiae
YBR239C
D
0.556
SKUD_138701
Saccharomyces kudriavzevii
SKUD_138701
I
0.556
SU7_0276
Saccharomyces arboricola
SU7_0276
I
0.556
1958_YBR239C
Saccharomyces paradoxus
1958_YBR239C
I
0.556
2111_Multiple
Saccharomyces bayanus
2111_Multiple
I
0.556
4840_YBR239C
Saccharomyces mikatae
4840_YBR239C
I
0.556