Ecym_7239 (Eremothecium cymbalariae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 Ecym_7239 T366610_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGT1
M00092_2.00 		Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG		 PBM
Badis et al.(2008)
RGT1_2131 		0.549 0.625
RGT1
M01585_2.00 		Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD		 PBM
Zhu et al.(2009)
Rgt1 		0.549 0.625
RGT1
M07518_2.00 		Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1 		0.549 0.625
RGT1
M08673_2.00 		Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN		 Misc
DeBoer et al.(2011)
YKL038W_803 		0.549 0.625
RGT1
M11480_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RGT1_Q5 		0.549 0.625
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AET41084 Zinc cluster 80 121

Links

Other Zinc cluster family TFs
Other Eremothecium cymbalariae TFs

15 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RGT1 Saccharomyces cerevisiae YKL038W D 0.549
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I 0.604
AGOS_AGL083W Ashbya gossypii AGOS_AGL083W I 0.604
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I 0.566
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I 0.574
SU7_2014 Saccharomyces arboricola SU7_2014 I 0.549
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I 0.628
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I 0.564
ZBAI_08469 Zygosaccharomyces bailii ZBAI_08469 I 0.564
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I 0.580
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I 0.566
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I 0.549
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I 0.549
KLLA0_F25630g Kluyveromyces lactis KLLA0_F25630g N 0.553
666_YBR033W Saccharomyces bayanus 666_YBR033W N 0.566