CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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14629_YKL038W
(
Saccharomyces bayanus
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
14629_YKL038W
T390762_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.675
0.875
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.675
0.875
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.675
0.875
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.675
0.875
RGT1
M11480_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.675
0.875
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
14629_YKL038W
Zinc cluster
45
86
RACDQCRKKKIKCDYKDEKGLCSNCQRNGDRCSFERVPLKRG
Links
Other
Zinc cluster
family TFs
Other
Saccharomyces bayanus
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SU7_2014
Saccharomyces arboricola
SU7_2014
I
0.675
RGT1
Saccharomyces cerevisiae
YKL038W
D
0.675
13626_YKL038W
Saccharomyces paradoxus
13626_YKL038W
I
0.675
KNAG_0A07100
Kazachstania naganishii
KNAG_0A07100
I
0.658
13522_YKL038W
Saccharomyces mikatae
13522_YKL038W
I
0.658
Kpol_1002p5
Vanderwaltozyma polyspora
Kpol_1002p5
I
0.650
CAGL0L01903g
Candida glabrata
CAGL0L01903g
I
0.600
AACERI_AaceriAGL083W
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAGL083W
I
0.595
AGOS_AGL083W
Ashbya gossypii
AGOS_AGL083W
I
0.595
NCAS_0A04750
Naumovozyma castellii
NCAS_0A04750
I
0.595
Scas_Contig625.5
Saccharomyces castellii
Scas_Contig625.5
I
0.595
NDAI_0K01800
Naumovozyma dairenensis
NDAI_0K01800
I
0.587
TPHA_0C04280
Tetrapisispora phaffii
TPHA_0C04280
I
0.586
ZBAI_03469
Zygosaccharomyces bailii
ZBAI_03469
I
0.583
ZBAI_08469
Zygosaccharomyces bailii
ZBAI_08469
I
0.583
ZYRO0E05676g
Zygosaccharomyces rouxii
ZYRO0E05676g
I
0.583
SAKL0A09856g
Lachancea kluyveri
SAKL0A09856g
I
0.575
TDEL_0B06360
Torulaspora delbrueckii
TDEL_0B06360
I
0.558
Ecym_7239
Eremothecium cymbalariae
Ecym_7239
I
0.549
KAFR_0B01450
Kazachstania africana
KAFR_0B01450
I
0.549
DRE_01419
Drechslerella stenobrocha
DRE_01419
I
0.544
KLTH0D07260g
Lachancea thermotolerans
KLTH0D07260g
I
0.543
KLTH0D07260g
Kluyveromyces thermotolerans
KLTH0D07260g
I
0.543