Scas_Contig625.5 (Saccharomyces castellii)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 Scas_Contig625.5 T390693_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGT1
M00092_2.00 		Saccharomyces cerevisiae
CGGRDNWWHN
NDWWNHYCCG		 PBM
Badis et al.(2008)
RGT1_2131 		0.587 0.775
RGT1
M01585_2.00 		Saccharomyces cerevisiae
HCGGADNWWN
NWWNHTCCGD		 PBM
Zhu et al.(2009)
Rgt1 		0.587 0.775
RGT1
M07518_2.00 		Saccharomyces cerevisiae
NCGGADNAWHN
NDWTNHTCCGN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1 		0.587 0.775
RGT1
M08673_2.00 		Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN
NNNNDRTTWWTCCGRNNNHN		 Misc
DeBoer et al.(2011)
YKL038W_803 		0.587 0.775
RGT1
M11480_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RGT1_Q5 		0.587 0.775
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig625.5 Zinc cluster 73 114

Links

Other Zinc cluster family TFs
Other Saccharomyces castellii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NCAS_0A04750 Naumovozyma castellii NCAS_0A04750 I 0.683
NDAI_0K01800 Naumovozyma dairenensis NDAI_0K01800 I 0.675
KLLA0_F25630g Kluyveromyces lactis KLLA0_F25630g N 0.614
KLTH0D07260g Lachancea thermotolerans KLTH0D07260g I 0.600
KLTH0D07260g Kluyveromyces thermotolerans KLTH0D07260g I 0.600
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I 0.595
SU7_2014 Saccharomyces arboricola SU7_2014 I 0.587
RGT1 Saccharomyces cerevisiae YKL038W D 0.587
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I 0.587
TDEL_0B06360 Torulaspora delbrueckii TDEL_0B06360 I 0.586
Kwal_8109 Kluyveromyces waltii Kwal_8109 N 0.584
KAFR_0B01450 Kazachstania africana KAFR_0B01450 I 0.579
CAGL0L01903g Candida glabrata CAGL0L01903g I 0.570
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I 0.570
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I 0.570
NCAS_0A12580 Naumovozyma castellii NCAS_0A12580 N 0.569
Scas_Contig709.65 Saccharomyces castellii Scas_Contig709.65 N 0.569
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I 0.562
1116_YIL025C Saccharomyces paradoxus 1116_YIL025C I 0.559
1175_YBR033W Saccharomyces mikatae 1175_YBR033W I 0.559
LALA0_S02e01068g Lachancea lanzarotensis LALA0_S02e01068g N 0.558
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I 0.558
OIDMADRAFT_74650 Oidiodendron maius OIDMADRAFT_74650 N 0.548
SAKL0A09856g Lachancea kluyveri SAKL0A09856g I 0.545
DRE_01419 Drechslerella stenobrocha DRE_01419 I 0.544