CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HMPREF1624_04628
(
Sporothrix schenckii
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
HMPREF1624_04628
T371137_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FGRRES_07198
M01415_2.00
Fusarium graminearum
HCGGRDWTAN
NTAWHYCCGD
PBM
Lambert et al.(2019)
pTH11409
0.569
0.579
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERS99428
Zinc cluster
64
103
LSCAPCRVSKLKCDRESPCGNCLKKDRIDLCEYAPRPKKP
Links
Other
Zinc cluster
family TFs
Other
Sporothrix schenckii
TFs
28 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PGSC0003DMG400019263
Solanum tuberosum
PGSC0003DMG400019263
I
0.000
OPUNC07G16420
Oryza punctata
OPUNC07G16420
N
0.000
Pavir.J35704
Panicum virgatum
Pavir.J35704
N
0.000
Traes_2DS_B05DDA181
Triticum aestivum
Traes_2DS_B05DDA181
N
0.000
Traes_2BS_7190FAD1A
Triticum aestivum
Traes_2BS_7190FAD1A
N
0.000
Traes_2AS_FE9AC4EDD
Triticum aestivum
Traes_2AS_FE9AC4EDD
N
0.000
Solyc02g079970.2
Solanum lycopersicum
Solyc02g079970.2
N
0.000
Si030877m.g
Setaria italica
Si030877m.g
N
0.000
Sb02g035580
Sorghum bicolor
Sb02g035580
N
0.000
PGSC0003DMG400021717
Solanum tuberosum
PGSC0003DMG400021717
N
0.000
OS07G0543000
Oryza sativa
OS07G0543000
N
0.000
ORUFI07G18300
Oryza rufipogon
ORUFI07G18300
N
0.000
BGIOSGA024146
Oryza indica
BGIOSGA024146
N
0.000
ONIVA07G15940
Oryza nivara
ONIVA07G15940
N
0.000
OMERI07G14510
Oryza meridionalis
OMERI07G14510
N
0.000
OLONG_014592
Oryza longistaminata
OLONG_014592
N
0.000
OGLUM07G17270
Oryza glumaepatula
OGLUM07G17270
N
0.000
OBART07G17630
Oryza barthii
OBART07G17630
N
0.000
OB07G23510
Oryza brachyantha
OB07G23510
N
0.000
MLOC_59511
Hordeum vulgare
MLOC_59511
N
0.000
LPERR07G15060
Leersia perrieri
LPERR07G15060
N
0.000
GRMZM2G058451
Zea mays
GRMZM2G058451
N
0.000
F775_29547
Aegilops tauschii
F775_29547
N
0.000
BRADI1G25470
Brachypodium distachyon
BRADI1G25470
N
0.000