CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PGTG_09159
(
Puccinia graminis
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
PGTG_09159
T378188_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PGTG_09159
M02581_2.00
Puccinia graminis
WTCGGRAN
NTYCCGAW
PBM
Weirauch et al.(2014)
pTH7836
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.537
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M02581_2.00
Zinc cluster
51
91
RACGHCQKAHLTCDDGRPCLRCTKRGLSKTCTDGVRKKAKY
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EFP83206
Zinc cluster
87
127
RACGHCQKAHLTCDDGRPCLRCTKRGLSKTCTDGVRKKAKY
Links
Other
Zinc cluster
family TFs
Other
Puccinia graminis
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SERLA73DRAFT_72478
Serpula lacrymans
SERLA73DRAFT_72478
I
0.540
PHACADRAFT_258404
Phanerochaete carnosa
PHACADRAFT_258404
I
0.540
PHLGIDRAFT_76307
Phlebiopsis gigantea
PHLGIDRAFT_76307
I
0.540
PHSY_000207
Pseudozyma hubeiensis
PHSY_000207
I
0.540
PILCRDRAFT_94123
Piloderma croceum
PILCRDRAFT_94123
I
0.540
PLEOSDRAFT_1083727
Pleurotus ostreatus
PLEOSDRAFT_1083727
I
0.540
POSPLDRAFT_113058
Postia placenta
POSPLDRAFT_113058
I
0.540
PSEUBRA_SCAF2g02944
Pseudozyma brasiliensis
PSEUBRA_SCAF2g02944
I
0.540
PTTG_02951
Puccinia triticina
PTTG_02951
I
0.683
SCHCODRAFT_257622
Schizophyllum commune
SCHCODRAFT_257622
I
0.540
PFL1_03021
Pseudozyma flocculosa
PFL1_03021
I
0.587
sr10662
Sporisorium reilianum
sr10662
I
0.540
UM01925
Ustilago maydis
UM01925
I
0.540
V565_004710
Rhizoctonia solani
V565_004710
I
0.540
estExt_fgeneshMC_kg.C_60018
Mucor circinelloides
estExt_fgeneshMC_kg.C_60018
I
0.570
fgeneshMC_pm.9_#_186
Mucor circinelloides
fgeneshMC_pm.9_#_186
I
0.570
fgeneshPB_pg.22__185
Phycomyces blakesleeanus
fgeneshPB_pg.22__185
I
0.570
fgeneshPB_pg.2__402
Phycomyces blakesleeanus
fgeneshPB_pg.2__402
I
0.570
gw1.3.368.1
Heterobasidion annosum
gw1.3.368.1
I
0.546
GLOINDRAFT_38994
Rhizophagus irregularis
GLOINDRAFT_38994
I
0.570
AMAG_11531
Allomyces macrogynus
AMAG_11531
I
0.570
RO3G_08081
Rhizopus oryzae
RO3G_08081
I
0.570
SPPG_09179
Spizellomyces punctatus
SPPG_09179
I
0.642
AGABI2DRAFT_221018
Agaricus bisporus
AGABI2DRAFT_221018
I
0.540
BN946_scf184656.g9
Trametes cinnabarina
BN946_scf184656.g9
I
0.540
CC1G_03210
Coprinopsis cinerea
CC1G_03210
I
0.540
CERSUDRAFT_154783
Ceriporiopsis subvermispora
CERSUDRAFT_154783
I
0.540
CY34DRAFT_590075
Suillus luteus
CY34DRAFT_590075
I
0.570
GALMADRAFT_535775
Galerina marginata
GALMADRAFT_535775
I
0.540
AMAG_10934
Allomyces macrogynus
AMAG_10934
I
0.570
HETIRDRAFT_245864
Heterobasidion irregulare
HETIRDRAFT_245864
I
0.546
K443DRAFT_671242
Laccaria amethystina
K443DRAFT_671242
I
0.540
LACBIDRAFT_399488
Laccaria bicolor
LACBIDRAFT_399488
I
0.540
M378DRAFT_10526
Amanita muscaria
M378DRAFT_10526
I
0.540
M413DRAFT_24478
Hebeloma cylindrosporum
M413DRAFT_24478
I
0.540
MELLADRAFT_118331
Melampsora laricipopulina
MELLADRAFT_118331
I
0.548
PaG_02922
Pseudozyma aphidis
PaG_02922
I
0.540
PAXRUDRAFT_830673
Paxillus rubicundulus
PAXRUDRAFT_830673
I
0.540