CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SEPMUDRAFT_86031
(
Sphaerulina musiva
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
SEPMUDRAFT_86031
T383632_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_07923
M01358_2.00
Aspergillus nidulans
NBCGKAHN
NDTMCGVN
PBM
Lambert et al.(2019)
pEX0223
0.550
0.525
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMF12753
Zinc cluster
11
50
TGCQRCKARKVKCDEGKPKCLACARHNVPCEYVDPQPRRS
Links
Other
Zinc cluster
family TFs
Other
Sphaerulina musiva
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_25995
Ancylostoma caninum
ANCCAN_25995
N
ANCCEY_12439
Ancylostoma ceylanicum
ANCCEY_12439
N
ANCDUO_06205
Ancylostoma duodenale
ANCDUO_06205
N
HCOI00479300
Haemonchus contortus
HCOI00479300
N
HPBE_0002067501
Heligmosomoides bakeri
HPBE_0002067501
N
HPLM_0000898801
Haemonchus placei
HPLM_0000898801
N
NBR_0001751501
Nippostrongylus brasiliensis
NBR_0001751501
N
NECAME_13887
Necator americanus
NECAME_13887
N
OESDEN_04759
Oesophagostomum dentatum
OESDEN_04759
N
OESDEN_15339
Oesophagostomum dentatum
OESDEN_15339
N