CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDAG_03890
(
Verticillium dahliae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDAG_03890
T387316_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EGY22452
Zinc cluster
17
55
RDCRACKTRGIKCDLNRPRCQPCVASELPCGGYPQRVVW
Links
Other
Zinc cluster
family TFs
Other
Verticillium dahliae
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDBG_02982
Verticillium albo atrum
VDBG_02982
N
0.683
FGRRES_17430
Fusarium graminearum
FGRRES_17430
N
0.559
FPSE_05701
Fusarium pseudograminearum
FPSE_05701
N
0.551
NechaG91591
Fusarium solani
NechaG91591
N
0.559
PMAA_017320
Talaromyces marneffei
PMAA_017320
N
0.554
TRIATDRAFT_129946
Trichoderma atroviride
TRIATDRAFT_129946
N
0.564
TRIREDRAFT_70351
Trichoderma reesei
TRIREDRAFT_70351
N
0.560
TRIVIDRAFT_39606
Trichoderma virens
TRIVIDRAFT_39606
N
0.539
VDBG_02982
Verticillium alfalfae
VDBG_02982
N
0.683
fgenesh1_pm.sca_44_chr3_2_0000059
Nectria haematococca
fgenesh1_pm.sca_44_chr3_2_0000059
N
0.559
PMAA_017320
Penicillium marneffei
PMAA_017320
N
0.554