CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
VDBG_04145
(
Verticillium alfalfae
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00172 (Zn_clus)
IPR001138
VDBG_04145
T387501_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EEY18036
Zinc cluster
45
85
LSCAACRVSKLKCDRSSPCGQCIRKGRPEACQYAPKPQRRK
Links
Other
Zinc cluster
family TFs
Other
Verticillium alfalfae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BBA_02662
Beauveria bassiana
BBA_02662
I
0.541
VDBG_04145
Verticillium albo atrum
VDBG_04145
N
0.683
CCM_07768
Cordyceps militaris
CCM_07768
N
0.558
TRIVIDRAFT_229828
Trichoderma virens
TRIVIDRAFT_229828
N
0.562
VDAG_01368
Verticillium dahliae
VDAG_01368
N
0.683