CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VDBG_04145
(
Verticillium albo atrum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
VDBG_04145
T357990_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VDBG_04145T0
Zinc cluster
45
85
LSCAACRVSKLKCDRSSPCGQCIRKGRPEACQYAPKPQRRK
Links
Other
Zinc cluster
family TFs
Other
Verticillium albo atrum
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_01368
Verticillium dahliae
VDAG_01368
N
0.683
VDBG_04145
Verticillium alfalfae
VDBG_04145
N
0.683
TRIVIDRAFT_229828
Trichoderma virens
TRIVIDRAFT_229828
N
0.562
CCM_07768
Cordyceps militaris
CCM_07768
N
0.558
BBA_02662
Beauveria bassiana
BBA_02662
I
0.541