VHEMI05522 (Torrubiella hemipterigena)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VHEMI05522 T387757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
col-21
M02600_2.00 		Neurospora crassa
CGGMGWTA
TAWCKCCG		 PBM
Weirauch et al.(2014)
pTH8945 		0.543 0.684
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEJ89697 Zinc cluster 28 67

Links

Other Zinc cluster family TFs
Other Torrubiella hemipterigena TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ORGLA06G0055700 Oryza glaberrima ORGLA06G0055700 N
Pavir.J28012 Panicum virgatum Pavir.J28012 N
Pavir.Fb00845 Panicum virgatum Pavir.Fb00845 N
TRIUR3_03303 Triticum urartu TRIUR3_03303 N
Traes_7DS_C57224E6E Triticum aestivum Traes_7DS_C57224E6E N
Traes_7DS_A234A13E1 Triticum aestivum Traes_7DS_A234A13E1 N
Traes_7BS_9D1E05CB7 Triticum aestivum Traes_7BS_9D1E05CB7 N
Traes_7AS_A4B5D1816 Triticum aestivum Traes_7AS_A4B5D1816 N
Traes_4AL_1D254E0E4 Triticum aestivum Traes_4AL_1D254E0E4 N
Si014404m.g Setaria italica Si014404m.g N
Sb07g006170 Sorghum bicolor Sb07g006170 N
OS06G0194400 Oryza sativa OS06G0194400 N
ORUFI06G06290 Oryza rufipogon ORUFI06G06290 N
BGIOSGA022464 Oryza indica BGIOSGA022464 N
ONIVA06G07020 Oryza nivara ONIVA06G07020 N
OMERI06G07230 Oryza meridionalis OMERI06G07230 N
OLONG_013315 Oryza longistaminata OLONG_013315 N
OGLUM06G06330 Oryza glumaepatula OGLUM06G06330 N
OB06G15600 Oryza brachyantha OB06G15600 N
MTR_3g101520 Medicago truncatula MTR_3g101520 N
MLOC_76431 Hordeum vulgare MLOC_76431 N
LPERR06G05590 Leersia perrieri LPERR06G05590 N
GRMZM2G173321 Zea mays GRMZM2G173321 N
GRMZM2G106673 Zea mays GRMZM2G106673 N
F775_06135 Aegilops tauschii F775_06135 N
BRADI1G45517 Brachypodium distachyon BRADI1G45517 N