SIP4 (Saccharomyces cerevisiae)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 YJL089W T388353_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SIP4
M00089_2.00		 Saccharomyces cerevisiae
NNNNNNCSGN
NCSGNNNNNN		 PBM
Badis et al.(2008)
SIP4_2067		 (Direct) (Direct)
SIP4
M01582_2.00		 Saccharomyces cerevisiae
NNNNNNNVVD
HBBNNNNNNN		 PBM
Zhu et al.(2009)
Sip4		 (Direct) (Direct)
SIP4
M07516_2.00		 Saccharomyces cerevisiae
YYCGGRR
YYCCGRR		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0380.1		 (Direct) (Direct)
SIP4
M08669_2.00		 Saccharomyces cerevisiae
NCGGNYNVMYSGR
YCSRKBNRNCCGN		 Misc
DeBoer et al.(2011)
YJL089W_2067		 (Direct) (Direct)
SIP4
M08670_2.00		 Saccharomyces cerevisiae
YYCGGRR
YYCCGRR		 Misc
DeBoer et al.(2011)
YJL089W_573		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CAT8
M00102_2.00 		Saccharomyces cerevisiae
NNNCCGGAN
NTCCGGNNN		 PBM
Badis et al.(2008)
CAT8_4532 		0.545 0.590
CAT8
M07529_2.00 		Saccharomyces cerevisiae
CCGGRN
NYCCGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0280.1 		0.545 0.590
CAT8
M08688_2.00 		Saccharomyces cerevisiae
NCGGNNNDVNGGNN
NNCCNBHNNNCCGN		 Misc
DeBoer et al.(2011)
YMR280C_33 		0.545 0.590
CAT8
M11485_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CAT8_Q6_01 		0.545 0.590
CAT8
M11486_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$CAT8_Q6 		0.545 0.590
acu-15
M02616_2.00 		Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN		 PBM
Weirauch et al.(2014)
pTH7801 		0.540 0.538
acu-15
M02617_2.00 		Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN		 PBM
Weirauch et al.(2014)
pTH8900 		0.540 0.538
FGRRES_09921
M02577_2.00 		Fusarium graminearum
NNCGGVNNNN
NNNNBCCGNN		 PBM
Weirauch et al.(2014)
pTH7794 		0.540 0.513
For this family, TFs with SR scores > 0.537 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00089_2.00 Zinc cluster 43 82
M01582_2.00 Zinc cluster 44 83

DNA Binding Domains

Protein ID Domain From To Sequence
YJL089W Zinc cluster 44 83

Links

Other Zinc cluster family TFs
Other Saccharomyces cerevisiae TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TPHA_0I02820 Tetrapisispora phaffii TPHA_0I02820 I 0.545
Kpol_1016p20 Vanderwaltozyma polyspora Kpol_1016p20 I 0.570
KUCA_T00004675001 Kuraishia capsulata KUCA_T00004675001 I 0.542
LELG_00667 Lodderomyces elongisporus LELG_00667 I 0.000
LELG_01997 Lodderomyces elongisporus LELG_01997 I 0.544
Mycgr3G66501 Zymoseptoria tritici Mycgr3G66501 I 0.000
PAS_chr4_0540 Komagataella pastoris PAS_chr4_0540 I 0.542
PICST_31755 Scheffersomyces stipitis PICST_31755 I 0.544
PICST_622 Scheffersomyces stipitis PICST_622 I 0.000
SKUD_164001 Saccharomyces kudriavzevii SKUD_164001 I 0.659
SPAPADRAFT_154694 Spathaspora passalidarum SPAPADRAFT_154694 I 0.544
SS1G_10339 Sclerotinia sclerotiorum SS1G_10339 I 0.000
KLTH0D03564g Lachancea thermotolerans KLTH0D03564g I 0.559
TRIATDRAFT_221379 Trichoderma atroviride TRIATDRAFT_221379 I 0.000
YALI0_C19151g Yarrowia lipolytica YALI0_C19151g I 0.543
ZBAI_02613 Zygosaccharomyces bailii ZBAI_02613 I 0.587
ZBAI_07009 Zygosaccharomyces bailii ZBAI_07009 I 0.587
ZYRO0G15136g Zygosaccharomyces rouxii ZYRO0G15136g I 0.562
estExt_Genewise1Plus.C_chr_12372 Mycosphaerella graminicola estExt_Genewise1Plus.C_chr_12372 I 0.000
fgenesh1_pg.C_chr_4.1000626 Pichia stipitis fgenesh1_pg.C_chr_4.1000626 I 0.544
gwh1.2.1.110.1 Pichia stipitis gwh1.2.1.110.1 I 0.000
KLTH0D03564g Kluyveromyces thermotolerans KLTH0D03564g I 0.559
SAKL0D05654g Lachancea kluyveri SAKL0D05654g I 0.553
XP_002493979.1 Pichia pastoris XP_002493979.1 I 0.542
DEHA2G02090g Debaryomyces hansenii DEHA2G02090g I 0.544
CPAG_01919 Candida parapsilosis CPAG_01919 I 0.000
AACERI_AaceriAFR096W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAFR096W I 0.544
AGOS_AFR096W Ashbya gossypii AGOS_AFR096W I 0.544
Bcin14g04080 Botrytis cinerea Bcin14g04080 I 0.000
BN7_1590 Wickerhamomyces ciferrii BN7_1590 I 0.000
CAGL0L03377g Candida glabrata CAGL0L03377g I 0.600
CFIO01_04476 Colletotrichum fioriniae CFIO01_04476 I 0.000
CORT_0A06750 Candida orthopsilosis CORT_0A06750 I 0.000
CORT_0B04760 Candida orthopsilosis CORT_0B04760 I 0.544
CPAG_00982 Candida parapsilosis CPAG_00982 I 0.544
DOTSEDRAFT_67755 Dothistroma septosporum DOTSEDRAFT_67755 I 0.000
Ecym_6340 Eremothecium cymbalariae Ecym_6340 I 0.544
GNLVRS01_PISO0I17586g Millerozyma farinosa GNLVRS01_PISO0I17586g I 0.583
GNLVRS01_PISO0J19347g Millerozyma farinosa GNLVRS01_PISO0J19347g I 0.583
GNLVRS01_PISO0K20118g Millerozyma farinosa GNLVRS01_PISO0K20118g I 0.544
GNLVRS01_PISO0L20119g Millerozyma farinosa GNLVRS01_PISO0L20119g I 0.544
KAFR_0A01480 Kazachstania africana KAFR_0A01480 I 0.574
KLLA0_F14322g Kluyveromyces lactis KLLA0_F14322g I 0.562
HPODL_02294 Ogataea parapolymorpha HPODL_02294 N 0.000
JL09_g2790 Pichia kudriavzevii JL09_g2790 N 0.000
SPPG_09102 Spizellomyces punctatus SPPG_09102 N 0.000
PGUG_00677 Candida guilliermondii PGUG_00677 N 0.000