fgenesh1_pg.C_chr_3.1000414 (Pichia stipitis)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 fgenesh1_pg.C_chr_3.1000414 T390010_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh1_pg.C_chr_3.1000414 Zinc cluster 51 90

Links

Other Zinc cluster family TFs
Other Pichia stipitis TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_5BL_04BDEB5D8 Triticum aestivum Traes_5BL_04BDEB5D8 N 0.000
ORGLA10G0063900 Oryza glaberrima ORGLA10G0063900 N 0.000
ORUFI03G06680 Oryza rufipogon ORUFI03G06680 N 0.000
ORUFI10G08100 Oryza rufipogon ORUFI10G08100 N 0.000
OS03G0193000 Oryza sativa OS03G0193000 N 0.000
Sb01g044280 Sorghum bicolor Sb01g044280 N 0.000
Si035052m.g Setaria italica Si035052m.g N 0.000
Si035089m.g Setaria italica Si035089m.g N 0.000
Traes_4AS_C30034054 Triticum aestivum Traes_4AS_C30034054 N 0.000
Traes_4BL_E20E75836 Triticum aestivum Traes_4BL_E20E75836 N 0.000
Traes_4DL_E50C77AEC Triticum aestivum Traes_4DL_E50C77AEC N 0.000
Traes_5AL_4C72C5BCB Triticum aestivum Traes_5AL_4C72C5BCB N 0.000
Traes_5AL_83E515188 Triticum aestivum Traes_5AL_83E515188 N 0.000
ORGLA03G0065600 Oryza glaberrima ORGLA03G0065600 N 0.000
Traes_5BL_700283665 Triticum aestivum Traes_5BL_700283665 N 0.000
Traes_5DL_88247E2B8 Triticum aestivum Traes_5DL_88247E2B8 N 0.000
Traes_5DL_A39210547 Triticum aestivum Traes_5DL_A39210547 N 0.000
TRIUR3_16715 Triticum urartu TRIUR3_16715 N 0.000
TRIUR3_25879 Triticum urartu TRIUR3_25879 N 0.000
TRIUR3_30897 Triticum urartu TRIUR3_30897 N 0.000
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.000
Pavir.Ia02739 Panicum virgatum Pavir.Ia02739 N 0.000
Pavir.Ia04887 Panicum virgatum Pavir.Ia04887 N 0.000
Pavir.Ib00589 Panicum virgatum Pavir.Ib00589 N 0.000
Pavir.Ib02999 Panicum virgatum Pavir.Ib02999 N 0.000
OB10G15940 Oryza brachyantha OB10G15940 N 0.000
BRADI3G24210 Brachypodium distachyon BRADI3G24210 N 0.000
F775_08653 Aegilops tauschii F775_08653 N 0.000
F775_26780 Aegilops tauschii F775_26780 N 0.000
GRMZM2G028039 Zea mays GRMZM2G028039 N 0.000
GRMZM2G116638 Zea mays GRMZM2G116638 N 0.000
GRMZM5G885274 Zea mays GRMZM5G885274 N 0.000
LPERR03G06070 Leersia perrieri LPERR03G06070 N 0.000
LPERR10G05390 Leersia perrieri LPERR10G05390 N 0.000
MLOC_21553 Hordeum vulgare MLOC_21553 N 0.000
MLOC_36533 Hordeum vulgare MLOC_36533 N 0.000
OB03G16920 Oryza brachyantha OB03G16920 N 0.000
BGIOSGA032058 Oryza indica BGIOSGA032058 N 0.000
OBART03G06740 Oryza barthii OBART03G06740 N 0.000
OBART10G07700 Oryza barthii OBART10G07700 N 0.000
OGLUM03G06860 Oryza glumaepatula OGLUM03G06860 N 0.000
OGLUM10G07400 Oryza glumaepatula OGLUM10G07400 N 0.000
OLONG_001018 Oryza longistaminata OLONG_001018 N 0.000
OLONG_015869 Oryza longistaminata OLONG_015869 N 0.000
OMERI03G06660 Oryza meridionalis OMERI03G06660 N 0.000
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.000
ONIVA03G06470 Oryza nivara ONIVA03G06470 N 0.000
ONIVA10G07150 Oryza nivara ONIVA10G07150 N 0.000
OPUNC10G06730 Oryza punctata OPUNC10G06730 N 0.000