12667_YJL103C (Saccharomyces bayanus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 12667_YJL103C T390746_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GSM1
M01583_2.00 		Saccharomyces cerevisiae
NCGGVVNNNN
NNNNBBCCGN		 PBM
Zhu et al.(2009)
Gsm1 		0.683 0.949
GSM1
M00090_2.00 		Saccharomyces cerevisiae
DYYCCGGRRH
DYYCCGGRRH		 PBM
Badis et al.(2008)
YJL103C_4534 		0.683 0.949
GSM1
M08671_2.00 		Saccharomyces cerevisiae
NNHNBTCCGGAGNTWNNHNNN
NNNDNNWANCTCCGGAVNDNN		 Misc
DeBoer et al.(2011)
YJL103C_856 		0.683 0.949
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
12667_YJL103C Zinc cluster 18 58

Links

Other Zinc cluster family TFs
Other Saccharomyces bayanus TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA031107 Oryza indica BGIOSGA031107 N
OBART09G16690 Oryza barthii OBART09G16690 N
OGLUM09G17290 Oryza glumaepatula OGLUM09G17290 N
OLONG_008085 Oryza longistaminata OLONG_008085 N
OMERI09G12370 Oryza meridionalis OMERI09G12370 N
ONIVA09G17770 Oryza nivara ONIVA09G17770 N
ORGLA09G0131700 Oryza glaberrima ORGLA09G0131700 N
OS09G0520400 Oryza sativa OS09G0520400 N