CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_Genewise1Plus.C_21651
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_Genewise1Plus.C_21651
T391213_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU05411
M02611_2.00
Neurospora crassa
NNNYCCGGRHNNN
NNNDYCCGGRNNN
PBM
Weirauch et al.(2014)
pTH9700
0.574
0.750
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_Genewise1Plus.C_21651
Zinc cluster
33
72
AACLTCRKRKTRCDGEKPICSACEKNGHQCLGYPDAHQRK
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU05411
Neurospora crassa
NCU05411
D
0.574
BBA_03452
Beauveria bassiana
BBA_03452
I
0.580
CCM_02166
Cordyceps militaris
CCM_02166
I
0.580
F503_00471
Ophiostoma piceae uamh
F503_00471
I
0.545
FFUJ_01862
Fusarium fujikuroi
FFUJ_01862
I
0.570
FGRRES_01638
Fusarium graminearum
FGRRES_01638
I
0.540
FOXG_11065
Fusarium oxysporum
FOXG_11065
I
0.570
FPSE_09752
Fusarium pseudograminearum
FPSE_09752
I
0.540
FVEG_09736
Fusarium verticillioides
FVEG_09736
I
0.570
GGTG_04497
Gaeumannomyces graminis
GGTG_04497
I
0.543
MAPG_08463
Magnaporthe poae
MAPG_08463
I
0.543
MYCTH_2312830
Myceliophthora thermophila
MYCTH_2312830
I
0.546
NEUTE1DRAFT_102079
Neurospora tetrasperma
NEUTE1DRAFT_102079
I
0.574
SMAC_04150
Sordaria macrospora
SMAC_04150
I
0.576
THITE_2124588
Thielavia terrestris
THITE_2124588
I
0.546
estExt_Genewise1Plus.C_110569
Neurospora discreta
estExt_Genewise1Plus.C_110569
I
0.574