XP_002490909.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002490909.1 T392294_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.566 0.700
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.566 0.700
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.566 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002490909.1 Zinc cluster 10 49

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PCH_Pc21g12810 Penicillium rubens PCH_Pc21g12810 N 0.000
PDE_05926 Penicillium oxalicum PDE_05926 N 0.000
PITC_024470 Penicillium italicum PITC_024470 N 0.000
PV05_04333 Exophiala xenobiotica PV05_04333 N 0.000
PV06_01296 Exophiala oligosperma PV06_01296 N 0.000
Pc21g12810 Penicillium chrysogenum Pc21g12810 N 0.000