XP_002490909.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002490909.1 T392294_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARG81
M08441_2.00 		Saccharomyces cerevisiae
DTGACTCH
DGAGTCAH		 ChIP-chip
Mathelier et al.(2014)
MA0272.1 		0.566 0.700
ARG81
M08685_2.00 		Saccharomyces cerevisiae
CGGYVKCGG
CCGMBRCCG		 Misc
DeBoer et al.(2011)
YML099C_1506 		0.566 0.700
ARG81
M11484_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$ARGRII_01 		0.566 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002490909.1 Zinc cluster 10 49

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PAS_chr2-1_0029 Komagataella pastoris PAS_chr2-1_0029 I 0.683
KNAG_0J00210 Kazachstania naganishii KNAG_0J00210 I 0.567
NCAS_0C00220 Naumovozyma castellii NCAS_0C00220 I 0.567
TDEL_0B00480 Torulaspora delbrueckii TDEL_0B00480 I 0.567
ZBAI_03002 Zygosaccharomyces bailii ZBAI_03002 I 0.567
ZBAI_08687 Zygosaccharomyces bailii ZBAI_08687 I 0.567
ZYRO0A00440g Zygosaccharomyces rouxii ZYRO0A00440g I 0.567
Scas_Contig626.6 Saccharomyces castellii Scas_Contig626.6 I 0.567
18194_YML099C Saccharomyces bayanus 18194_YML099C I 0.567
AACERI_AaceriAAL175W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAAL175W I 0.566
AGOS_AAL175W Ashbya gossypii AGOS_AAL175W I 0.566
Ecym_8159 Eremothecium cymbalariae Ecym_8159 I 0.566
KLTH0E16500g Lachancea thermotolerans KLTH0E16500g I 0.566
SKUD_195006 Saccharomyces kudriavzevii SKUD_195006 I 0.566
SU7_2431 Saccharomyces arboricola SU7_2431 I 0.566
ARG81 Saccharomyces cerevisiae YML099C D 0.566
16040_YML099C Saccharomyces mikatae 16040_YML099C I 0.566
17710_YML099C Saccharomyces paradoxus 17710_YML099C I 0.566
KLTH0E16500g Kluyveromyces thermotolerans KLTH0E16500g I 0.566
Kwal_9688 Kluyveromyces waltii Kwal_9688 I 0.566
KLLA0_D10197g Kluyveromyces lactis KLLA0_D10197g I 0.562
KAFR_0L02130 Kazachstania africana KAFR_0L02130 I 0.550
NDAI_0K00150 Naumovozyma dairenensis NDAI_0K00150 I 0.550
SAKL0D00264g Lachancea kluyveri SAKL0D00264g I 0.550