AMTR_s00009p00268560 (Amborella trichopoda)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AMTR_s00009p00268560 T000339_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.861 0.960
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.854 0.960
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.854 0.960
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.721 0.840
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.721 0.840
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.690 0.840
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.690 0.840
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.680 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERM95240 AP2 222 273

Links

Other AP2 family TFs
Other Amborella trichopoda TFs

459 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R007355 Calypte anna Aan_R007355 I 0.000
Afo_R004850 Aptenodytes forsteri Afo_R004850 I 0.000
BACH1 Pteropus vampyrus ENSPVAG00000003585 I 0.000
BACH1 Myotis lucifugus ENSMLUG00000010419 I 0.000
BACH1 Macaca mulatta ENSMMUG00000011095 I 0.000
BACH1 Monodelphis domestica ENSMODG00000020976 I 0.000
Bach1 Mus musculus ENSMUSG00000025612 D 0.000
BACH1 Ornithorhynchus anatinus ENSOANG00000005242 I 0.000
BACH1 Anolis carolinensis ENSACAG00000001974 I 0.000
BACH1 Otolemur garnettii ENSOGAG00000012819 I 0.000
BACH1 Ochotona princeps ENSOPRG00000003937 I 0.000
BACH1 Pan troglodytes ENSPTRG00000013824 I 0.000
BACH1 Oryctolagus cuniculus ENSOCUG00000016716 I 0.000
Bach1 Rattus norvegicus ENSRNOG00000001582 I 0.000
BACH1 Sorex araneus ENSSARG00000010869 I 0.000
BACH1 Sus scrofa ENSSSCG00000012029 I 0.000
BACH1 Taeniopygia guttata ENSTGUG00000013585 I 0.000
BACH1 Vicugna pacos ENSVPAG00000012419 I 0.000
bach1 Xenopus tropicalis XB-GENE-957116 I 0.000
BACH1 Echinops telfairi ENSETEG00000017222 I 0.000
BACH1 Choloepus hoffmanni ENSCHOG00000008331 I 0.000
BACH1 Callithrix jacchus ENSCJAG00000008651 I 0.000
BACH1 Canis familiaris ENSCAFG00000008729 I 0.000
BACH1 Cavia porcellus ENSCPOG00000008737 I 0.000
BACH1 Dasypus novemcinctus ENSDNOG00000034053 I 0.000
BACH1 Equus caballus ENSECAG00000000307 I 0.000
BACH1 Bos taurus ENSBTAG00000004139 I 0.000
BACH1 Felis catus ENSFCAG00000010547 I 0.000
BACH1 Homo sapiens ENSG00000156273 D 0.000
BACH1 Gallus gallus ENSGALG00000015828 I 0.000
BACH1 Gorilla gorilla ENSGGOG00000006094 I 0.000
BACH1 Meleagris gallopavo ENSMGAG00000014508 I 0.000
Brh_R008770 Buceros rhinoceros Brh_R008770 I 0.000
Cmyd_10011594 Chelonia mydas Cmyd_10011594 I 0.000
ENSAMEG00000008438 Ailuropoda melanoleuca ENSAMEG00000008438 I 0.000
ENSAPLG00000004662 Anas platyrhynchos ENSAPLG00000004662 I 0.000
ENSBTAP00000005416-D1 Bos grunniens ENSBTAP00000005416-D1 I 0.000
ENSCSAG00000009211 Chlorocebus sabaeus ENSCSAG00000009211 I 0.000
ENSFALG00000006318 Ficedula albicollis ENSFALG00000006318 I 0.000
ENSLACG00000001994 Latimeria chalumnae ENSLACG00000001994 I 0.000
ENSMPUG00000001053 Mustela putorius furo ENSMPUG00000001053 I 0.000
ENSNLEG00000003356 Nomascus leucogenys ENSNLEG00000003356 I 0.000
ENSOARG00000014393 Ovis aries ENSOARG00000014393 I 0.000
ENSP00000286800 Macaca fascicularis ENSP00000286800 I 0.000
ENSPANG00000007661 Papio anubis ENSPANG00000007661 I 0.000
ENSPPYG00000011322 Pongo abelii ENSPPYG00000011322 I 0.000
ENSPSIG00000016485 Pelodiscus sinensis ENSPSIG00000016485 I 0.000
ENSSHAG00000006419 Sarcophilus harrisii ENSSHAG00000006419 I 0.000
ENSSTOG00000003942 Ictidomys tridecemlineatus ENSSTOG00000003942 I 0.000
ENSTSYG00000010694 Tarsius syrichta ENSTSYG00000010694 I 0.000
Gfo_R008348 Geospiza fortis Gfo_R008348 I 0.000
Myotis_brandtii_BACH1_10005484 Myotis brandtii Myotis_brandtii_BACH1_10005484 I 0.000
Ogr07752 Ophisaurus gracilis Ogr07752 I 0.000
Pvit_10701 Pogona vitticeps Pvit_10701 I 0.000
Tal_R000432 Tyto alba Tal_R000432 I 0.000