RAP2-13 (Arabidopsis thaliana)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 AT1G22190 T000412_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.867 1.000
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.848 0.960
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.848 0.960
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.721 0.860
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.721 0.860
ERF054
M06647_2.00 		Arabidopsis thaliana
NNNNNNNNNHHDSCRCCGHC
GDCGGYGSHDDNNNNNNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_col_a 		0.684 0.820
ERF054
M06648_2.00 		Arabidopsis thaliana
NNNNHDBCRCCGHCM
KGDCGGYGVHDNNNN		 Dap-seq
OMalley et al.(2016)
At4g28140_colamp_a 		0.684 0.820
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.683 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT1G22190.1 AP2 81 132

Links

Other AP2 family TFs
Other Arabidopsis thaliana TFs

457 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005677 Calypte anna Aan_R005677 I 0.000
Afo_R004508 Aptenodytes forsteri Afo_R004508 I 0.000
ENSAMEG00000018337 Ailuropoda melanoleuca ENSAMEG00000018337 I 0.000
ENSAMXG00000014502 Astyanax mexicanus ENSAMXG00000014502 I 0.000
ENSAPLG00000011380 Anas platyrhynchos ENSAPLG00000011380 I 0.000
ENSCPOG00000006636 Cavia porcellus ENSCPOG00000006636 I 0.000
ENSCSAG00000012122 Chlorocebus sabaeus ENSCSAG00000012122 I 0.000
ENSDORG00000012888 Dipodomys ordii ENSDORG00000012888 I 0.000
ENSFALG00000006358 Ficedula albicollis ENSFALG00000006358 I 0.000
ENSLACG00000018083 Latimeria chalumnae ENSLACG00000018083 I 0.000
ENSLOCG00000010526 Lepisosteus oculatus ENSLOCG00000010526 I 0.000
ENSMEUG00000011212 Macropus eugenii ENSMEUG00000011212 I 0.000
ENSMICG00000016031 Microcebus murinus ENSMICG00000016031 I 0.000
ENSMLUG00000002256 Myotis lucifugus ENSMLUG00000002256 I 0.000
ENSMLUG00000026078 Myotis lucifugus ENSMLUG00000026078 I 0.000
ENSMMUP00000003747 Macaca fascicularis ENSMMUP00000003747 I 0.000
ENSMPUG00000009147 Mustela putorius furo ENSMPUG00000009147 I 0.000
ENSNLEG00000016475 Nomascus leucogenys ENSNLEG00000016475 I 0.000
ENSOARG00000001796 Ovis aries ENSOARG00000001796 I 0.000
ENSP00000267569-D1 Bos grunniens ENSP00000267569-D1 I 0.000
ENSPANG00000019986 Papio anubis ENSPANG00000019986 I 0.000
ENSPPYG00000006004 Pongo abelii ENSPPYG00000006004 I 0.000
ENSPSIG00000017647 Pelodiscus sinensis ENSPSIG00000017647 I 0.000
ENSSHAG00000017391 Sarcophilus harrisii ENSSHAG00000017391 I 0.000
ENSSTOG00000026831 Ictidomys tridecemlineatus ENSSTOG00000026831 I 0.000
ENSTBEG00000014483 Tupaia belangeri ENSTBEG00000014483 I 0.000
Gfo_R012906 Geospiza fortis Gfo_R012906 I 0.000
JDP2 Pan troglodytes ENSPTRG00000006555 I 0.000
JDP2 Pteropus vampyrus ENSPVAG00000000672 I 0.000
Jdp2 Rattus norvegicus ENSRNOG00000008224 D 0.000
JDP2 Monodelphis domestica ENSMODG00000005909 I 0.000
JDP2 Taeniopygia guttata ENSTGUG00000012219 I 0.000
JDP2 Ochotona princeps ENSOPRG00000012032 I 0.000
JDP2 Oryctolagus cuniculus ENSOCUG00000008466 I 0.000
JDP2 Bos taurus ENSBTAG00000009451 I 0.000
JDP2 Canis familiaris ENSCAFG00000017042 I 0.000
JDP2 Callithrix jacchus ENSCJAG00000020645 I 0.000
JDP2 Dasypus novemcinctus ENSDNOG00000033141 I 0.000
JDP2 Equus caballus ENSECAG00000014862 I 0.000
JDP2 Felis catus ENSFCAG00000029464 I 0.000
JDP2 Homo sapiens ENSG00000140044 D 0.000
JDP2 Gallus gallus ENSGALG00000010322 I 0.000
JDP2 Gorilla gorilla ENSGGOG00000010752 I 0.000
JDP2 Loxodonta africana ENSLAFG00000025757 I 0.000
JDP2 Meleagris gallopavo ENSMGAG00000012755 I 0.000
JDP2 Anolis carolinensis ENSACAG00000016944 I 0.000
Jdp2 Mus musculus ENSMUSG00000034271 D 0.000
JDP2 Otolemur garnettii ENSOGAG00000024796 I 0.000
jdp2a Danio rerio ENSDARG00000040137 I 0.000
Myotis_brandtii_JDP2_10012947 Myotis brandtii Myotis_brandtii_JDP2_10012947 I 0.000
Myotis_brandtii_ZNF570_10005459 Myotis brandtii Myotis_brandtii_ZNF570_10005459 I 0.000
Ogr08030 Ophisaurus gracilis Ogr08030 I 0.000
Pvit_01216 Pogona vitticeps Pvit_01216 I 0.000