CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ERF024
(
Arabidopsis thaliana
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
AT2G36450
T000455_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF024
M01614_2.00
Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN
PBM
Weirauch et al.(2014)
pTH8206
(Direct)
(Direct)
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
For this family, TFs with SR scores >
0.677
will likely have a similar motif
Experimental Constructs
Motif ID
Domain
From
To
Sequence
M01614_2.00
AP2
13
65
PLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGS
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT2G36450.1
AP2
13
65
PLYRGVRQRKNSNKWVSEIREPRKPNRIWLGTFSTPEMAAIAYDVAALALKGS
Links
Other
AP2
family TFs
Other
Arabidopsis thaliana
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo3g030140
Brassica oleracea
Bo3g030140
I
0.745
Bo4g034600
Brassica oleracea
Bo4g034600
I
0.804
Bo4g186300
Brassica oleracea
Bo4g186300
I
0.764
Bostr.23794s0446
Boechera stricta
Bostr.23794s0446
I
0.804
Bra017235
Brassica rapa
Bra017235
I
0.768
Bra023070
Brassica rapa
Bra023070
I
0.745
Cagra.0228s0035
Capsella grandiflora
Cagra.0228s0035
I
0.768
Carubv10024954m.g
Capsella rubella
Carubv10024954m.g
I
0.768
HRD
Arabidopsis lyrata
scaffold_402264.1
I
0.817
PGSC0003DMG400045042
Solanum tuberosum
PGSC0003DMG400045042
I
0.688
Solyc10g083560.1
Solanum lycopersicum
Solyc10g083560.1
I
0.690
Thhalv10017537m.g
Eutrema salsugineum
Thhalv10017537m.g
I
0.786