BGIOSGA011326 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA011326 T000587_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.693 0.735
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA011326-PA AP2 95 146

Links

Other AP2 family TFs
Other Oryza indica TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29584.m000234 Ricinus communis 29584.m000234 I 0.679
29680.m001678 Ricinus communis 29680.m001678 I 0.678
29895.m000321 Ricinus communis 29895.m000321 I 0.680
29900.m001561 Ricinus communis 29900.m001561 I 0.677
AC206951.3_FG016 Zea mays AC206951.3_FG016 N 0.690
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.739
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.679
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.694
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.699
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.698
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.678
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.741
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.694
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.680
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.703
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.679
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.679
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.679
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.712
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.679
Ca_07754 Cicer arietinum Ca_07754 I 0.689
Ca_12081 Cicer arietinum Ca_12081 I 0.695
Ca_23170 Cicer arietinum Ca_23170 I 0.681
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.706
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.685
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.681
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.699
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.702
Cla006080 Citrullus lanatus Cla006080 I 0.677
Cla007697 Citrullus lanatus Cla007697 I 0.678
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.678
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.699
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.706
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.681
F775_25471 Aegilops tauschii F775_25471 I 0.690
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.689
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.686
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.698
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.689
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.689
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.696
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.703
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.706
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.704
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.694
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.694
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.684
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.677
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.680
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.689
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.699
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.678
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.678
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.683
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.681
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.683
MDP0000127134 Malus domestica MDP0000127134 I 0.681
MDP0000167207 Malus domestica MDP0000167207 I 0.681
MDP0000235313 Malus domestica MDP0000235313 I 0.681
MDP0000246808 Malus domestica MDP0000246808 I 0.709
MDP0000322279 Malus domestica MDP0000322279 I 0.696
MDP0000447570 Malus domestica MDP0000447570 I 0.709
MDP0000855671 Malus domestica MDP0000855671 I 0.689
mgf018693m Mimulus guttatus mgf018693m I 0.703
mgf023600m Mimulus guttatus mgf023600m I 0.700
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.681
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.681
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.689
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.695
OBART03G06100 Oryza barthii OBART03G06100 I 0.821
OBART07G26160 Oryza barthii OBART07G26160 N 0.698
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.690
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I 0.821
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.699
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.698
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.821
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.699
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.698
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.694
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.690
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.821
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.699
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.698
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.694
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.792
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.699
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.682
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.698
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.681
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.699
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.702
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.694
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.690
ORGLA03G0058900 Oryza glaberrima ORGLA03G0058900 I 0.821
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.699
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.698
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.690
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.699
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.698
OS01G0313300 Oryza sativa OS01G0313300 I 0.694
OS03G0183300 Oryza sativa OS03G0183300 I 0.821
OS03G0341000 Oryza sativa OS03G0341000 N 0.699
OS07G0674800 Oryza sativa OS07G0674800 N 0.698
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.693
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.706
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.706
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.694
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.730
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.716
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.740
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.694
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.729
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.678
Pm009382 Prunus mume Pm009382 I 0.681
Pm020604 Prunus mume Pm020604 I 0.692
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.699
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.701
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.678
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.700
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.703
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.680
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.680
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.692
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.681
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.699
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.686
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.677
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.677
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.701
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.686
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.677
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.679
Sb01g045040 Sorghum bicolor Sb01g045040 I 0.715
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.714
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.704
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.694
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.687
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.687
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.678
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.678
Si002845m.g Setaria italica Si002845m.g I 0.694
Si031079m.g Setaria italica Si031079m.g I 0.706
Si036118m.g Setaria italica Si036118m.g I 0.733
Si038911m.g Setaria italica Si038911m.g I 0.680
TCM_020871 Theobroma cacao TCM_020871 I 0.688
TCM_026233 Theobroma cacao TCM_026233 I 0.706
TCM_026234 Theobroma cacao TCM_026234 I 0.684
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.694
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.690
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.728
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.765
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.694
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.694
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.687
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.687
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.682