Bo6g073020 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo6g073020 T000862_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.800 0.960
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.759 0.900
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.690 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo6g073020.1 AP2 20 71

Links

Other AP2 family TFs
Other Brassica oleracea TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004848 Oryza indica BGIOSGA004848 N 0.000
BGIOSGA034823 Oryza indica BGIOSGA034823 N 0.000
cassava13394.valid.m1 Manihot esculenta cassava13394.valid.m1 N 0.000
cassava14235.m1 Manihot esculenta cassava14235.m1 N 0.000
cassava15688.m1 Manihot esculenta cassava15688.m1 N 0.000
cassava32867.m1 Manihot esculenta cassava32867.m1 N 0.000
Ciclev10029032m.g Citrus clementina Ciclev10029032m.g N 0.000
Cla008777 Citrullus lanatus Cla008777 N 0.000
Cucsa.185760 Cucumis sativus Cucsa.185760 N 0.000
Cucsa.319840 Cucumis sativus Cucsa.319840 I 0.000
Eucgr.A02635 Eucalyptus grandis Eucgr.A02635 N 0.000
Eucgr.A02636 Eucalyptus grandis Eucgr.A02636 N 0.000
Eucgr.A02638 Eucalyptus grandis Eucgr.A02638 N 0.000
Eucgr.A02639 Eucalyptus grandis Eucgr.A02639 N 0.000
Eucgr.J00518 Eucalyptus grandis Eucgr.J00518 N 0.000
evm.TU.supercontig_104.98 Carica papaya evm.TU.supercontig_104.98 N 0.000
evm.TU.supercontig_195.14 Carica papaya evm.TU.supercontig_195.14 N 0.000
F775_19761 Aegilops tauschii F775_19761 N 0.000
GLYMA03G35570 Glycine max GLYMA03G35570 N 0.000
GLYMA12G31150 Glycine max GLYMA12G31150 N 0.000
GLYMA13G39160 Glycine max GLYMA13G39160 N 0.000
GLYMA19G38211 Glycine max GLYMA19G38211 N 0.000
Gorai.001G122800 Gossypium raimondii Gorai.001G122800 N 0.000
Gorai.002G238300 Gossypium raimondii Gorai.002G238300 N 0.000
Gorai.006G113000 Gossypium raimondii Gorai.006G113000 N 0.000
GRMZM2G439903 Zea mays GRMZM2G439903 N 0.000
GRMZM2G465835 Zea mays GRMZM2G465835 N 0.000
GRMZM5G832473 Zea mays GRMZM5G832473 N 0.000
GSMUA_Achr10G04720_001 Musa acuminata GSMUA_Achr10G04720_001 N 0.000
GSMUA_Achr6G19400_001 Musa acuminata GSMUA_Achr6G19400_001 N 0.000
GSMUA_Achr8G01410_001 Musa acuminata GSMUA_Achr8G01410_001 N 0.000
GSMUA_Achr9G29750_001 Musa acuminata GSMUA_Achr9G29750_001 N 0.000
LjSGA_014778.2 Lotus japonicus LjSGA_014778.2 N 0.000
LPERR01G32790 Leersia perrieri LPERR01G32790 N 0.000
LPERR05G14390 Leersia perrieri LPERR05G14390 N 0.000
Lus10004846.g Linum usitatissimum Lus10004846.g N 0.000
Lus10020643.g Linum usitatissimum Lus10020643.g N 0.000
MDP0000130797 Malus domestica MDP0000130797 N 0.000
MDP0000205938 Malus domestica MDP0000205938 N 0.000
MDP0000759504 Malus domestica MDP0000759504 N 0.000
mgf024293m Mimulus guttatus mgf024293m N 0.000
MLOC_7757 Hordeum vulgare MLOC_7757 N 0.000
MTR_7g105170 Medicago truncatula MTR_7g105170 N 0.000
OB05G26010 Oryza brachyantha OB05G26010 N 0.000
OB11G12830 Oryza brachyantha OB11G12830 N 0.000
OBART01G38190 Oryza barthii OBART01G38190 N 0.000
OBART11G03530 Oryza barthii OBART11G03530 N 0.000
OGLUM01G42380 Oryza glumaepatula OGLUM01G42380 N 0.000
OGLUM03G09050 Oryza glumaepatula OGLUM03G09050 N 0.000
OGLUM11G03170 Oryza glumaepatula OGLUM11G03170 N 0.000
OMERI01G35090 Oryza meridionalis OMERI01G35090 N 0.000
OMERI11G03230 Oryza meridionalis OMERI11G03230 N 0.000
ONIVA01G42870 Oryza nivara ONIVA01G42870 N 0.000
ONIVA06G01110 Oryza nivara ONIVA06G01110 N 0.000
ONIVA11G03690 Oryza nivara ONIVA11G03690 N 0.000
OPUNC01G36980 Oryza punctata OPUNC01G36980 N 0.000
OPUNC11G03220 Oryza punctata OPUNC11G03220 N 0.000
orange1.1g023996m.g Citrus sinensis orange1.1g023996m.g N 0.000
ORGLA01G0320200 Oryza glaberrima ORGLA01G0320200 N 0.000
ORGLA11G0032800 Oryza glaberrima ORGLA11G0032800 N 0.000
ORGLA12G0180300 Oryza glaberrima ORGLA12G0180300 N 0.000
ORUFI01G41540 Oryza rufipogon ORUFI01G41540 N 0.000
ORUFI11G03420 Oryza rufipogon ORUFI11G03420 N 0.000
OS01G0862800 Oryza sativa OS01G0862800 N 0.000
OS11G0154500 Oryza sativa OS11G0154500 N 0.000
Pavir.Bb01366 Panicum virgatum Pavir.Bb01366 N 0.000
Pavir.Ea03745 Panicum virgatum Pavir.Ea03745 N 0.000
Pavir.Ha01768 Panicum virgatum Pavir.Ha01768 N 0.000
Pavir.Hb01808 Panicum virgatum Pavir.Hb01808 N 0.000
Pavir.J02276 Panicum virgatum Pavir.J02276 N 0.000
Pavir.J04751 Panicum virgatum Pavir.J04751 N 0.000
Pavir.J13106 Panicum virgatum Pavir.J13106 N 0.000
Pavir.J36282 Panicum virgatum Pavir.J36282 N 0.000
PGSC0003DMG400026332 Solanum tuberosum PGSC0003DMG400026332 N 0.000
PK27925.1 Cannabis sativa PK27925.1 N 0.000
PK29014.1 Cannabis sativa PK29014.1 N 0.000
Pm001403 Prunus mume Pm001403 N 0.000
Pm001404 Prunus mume Pm001404 N 0.000
POPTR_0009s02430 Populus trichocarpa POPTR_0009s02430 N 0.000
POPTR_0016s07690 Populus trichocarpa POPTR_0016s07690 N 0.000
PRUPE_ppa010337mg Prunus persica PRUPE_ppa010337mg N 0.000
SapurV1A.0630s0010 Salix purpurea SapurV1A.0630s0010 N 0.000
SapurV1A.0974s0010 Salix purpurea SapurV1A.0974s0010 N 0.000
Sb03g040720 Sorghum bicolor Sb03g040720 N 0.000
Sb05g003400 Sorghum bicolor Sb05g003400 N 0.000
Sb09g021780 Sorghum bicolor Sb09g021780 N 0.000
Si002586m.g Setaria italica Si002586m.g N 0.000
Si022966m.g Setaria italica Si022966m.g N 0.000
Si025833m.g Setaria italica Si025833m.g N 0.000
Si026707m.g Setaria italica Si026707m.g N 0.000
Solyc09g010160.1 Solanum lycopersicum Solyc09g010160.1 N 0.000
Solyc11g068620.1 Solanum lycopersicum Solyc11g068620.1 N 0.000
TCM_041364 Theobroma cacao TCM_041364 N 0.000
TRAES3BF019300010CFD_g Triticum aestivum TRAES3BF019300010CFD_g N 0.000
Traes_1AL_179FC28F2 Triticum aestivum Traes_1AL_179FC28F2 N 0.000
Traes_1AL_C76BCC7EC Triticum aestivum Traes_1AL_C76BCC7EC N 0.000
TRIUR3_34272 Triticum urartu TRIUR3_34272 N 0.000