Bo9g104770 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo9g104770 T000963_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.839 1.000
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.839 1.000
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.800 0.920
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.800 0.920
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.800 0.920
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.778 0.940
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.778 0.940
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.778 0.940
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.778 0.940
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.715 0.940
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.715 0.940
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.714 0.800
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.714 0.800
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.701 0.760
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.701 0.760
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.701 0.760
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.701 0.760
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.701 0.760
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.701 0.760
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.700 0.800
Q8S2T3_BRANA
M09745_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF16_01 		0.699 0.880
Q6T3U0_BRANA
M09743_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREBII1_01 		0.699 0.880
Q8S2T5_BRANA
M09746_2.00 		Brassica napus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CBF5_01 		0.693 0.900
ddf2
M00965_2.00 		Arabidopsis lyrata
NRYCGACAT
ATGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF2_Arabidopsis_lyrata 		0.678 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo9g104770.1 AP2 52 103

Links

Other AP2 family TFs
Other Brassica oleracea TFs

216 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB04090.1 Alternaria brassicicola AB04090.1 I
AB10568.1 Alternaria brassicicola AB10568.1 I
ACLA_039850 Aspergillus clavatus CADACLAG00003794 I
AFUA_3G11970 Aspergillus fumigatus CADAFUAG00005110 I
ANIA_02855 Aspergillus nidulans CADANIAG00010235 I
AOL_s00076g701 Arthrobotrys oligospora AOL_s00076g701 I
ARB_07827 Arthroderma benhamiae ARB_07827 I
AUEXF2481DRAFT_70429 Aureobasidium subglaciale AUEXF2481DRAFT_70429 I
BAUCODRAFT_135551 Baudoinia compniacensis BAUCODRAFT_135551 I
BDDG_07520 Blastomyces dermatitidis BDDG_07520 I
BGHDH14_bgh01021 Blumeria graminis BGHDH14_bgh01021 I
CADAFLAG00002433 Aspergillus flavus CADAFLAG00002433 I
CADANGAG00002305 Aspergillus niger CADANGAG00002305 I
CADAORAG00001352 Aspergillus oryzae CADAORAG00001352 I
CaO19.7247 Candida albicans CaO19.7247 I
CD36_13310 Candida dubliniensis CD36_13310 I
CIMG_03725 Coccidioides immitis CIMG_03725 I
CLUG_01736 Clavispora lusitaniae CLUG_01736 I
CLUG_01736 Candida lusitaniae CLUG_01736 I
CMQ_7385 Grosmannia clavigera CMQ_7385 I
COCC4DRAFT_68984 Bipolaris maydis COCC4DRAFT_68984 I
COCCADRAFT_5408 Bipolaris zeicola COCCADRAFT_5408 I
COCMIDRAFT_86168 Bipolaris oryzae COCMIDRAFT_86168 I
COCSADRAFT_184320 Bipolaris sorokiniana COCSADRAFT_184320 I
COCVIDRAFT_28133 Bipolaris victoriae COCVIDRAFT_28133 I
CPC735_005640 Coccidioides posadasii CPC735_005640 I
DACRYDRAFT_55334 Dacryopinax sp DACRYDRAFT_55334 I
EPUS_09090 Endocarpon pusillum EPUS_09090 I
estExt_Genewise1Plus.C_11296 Mycosphaerella fijiensis estExt_Genewise1Plus.C_11296 I
estExt_Genewise1Plus.C_11603 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_11603 I
EURHEDRAFT_457463 Aspergillus ruber EURHEDRAFT_457463 I
e_gw1.4.120.1 Mycosphaerella graminicola e_gw1.4.120.1 I
F503_05381 Ophiostoma piceae uamh F503_05381 I
fgenesh1_pg.00866_#_462 Aspergillus carbonarius fgenesh1_pg.00866_#_462 I
gw1.13.295.1 Phycomyces blakesleeanus gw1.13.295.1 I
gww2.13.348.1 Phanerochaete chrysosporium gww2.13.348.1 I
H072_3224 Dactylellina haptotyla H072_3224 I
H101_07360 Trichophyton interdigitale H101_07360 I
H102_08253 Trichophyton rubrum H102_08253 I
H105_08281 Trichophyton soudanense H105_08281 I
HCBG_07376 Histoplasma capsulatum HCBG_07376 I
KUCA_T00000054001 Kuraishia capsulata KUCA_T00000054001 N
LEMA_P072550.1 Leptosphaeria maculans LEMA_P072550.1 I
M407DRAFT_17900 Tulasnella calospora M407DRAFT_17900 I
M407DRAFT_84761 Tulasnella calospora M407DRAFT_84761 I
M408DRAFT_49948 Serendipita vermifera M408DRAFT_49948 I
M7I_4960 Glarea lozoyensis M7I_4960 I
MBM_08802 Marssonina brunnea MBM_08802 I
MCYG_01012 Microsporum canis MCYG_01012 I
MCYG_01012 Arthroderma otae MCYG_01012 I
MGYG_00974 Microsporum gypseum MGYG_00974 I
MPH_05702 Macrophomina phaseolina MPH_05702 I
Mycgr3G40797 Zymoseptoria tritici Mycgr3G40797 I
OIDMADRAFT_49510 Oidiodendron maius OIDMADRAFT_49510 I
orf19.7247 Candida albicans orf19.7247 D
PAAG_07204 Paracoccidioides sp lutzii PAAG_07204 I
PABG_11557 Paracoccidioides brasiliensis PABG_11557 I
PCH_Pc18g00420 Penicillium rubens PCH_Pc18g00420 I
PDE_05163 Penicillium oxalicum PDE_05163 I
PDIP_75300 Penicillium digitatum PDIP_75300 I
PEX1_059590 Penicillium expansum PEX1_059590 I
PHLGIDRAFT_44970 Phlebiopsis gigantea PHLGIDRAFT_44970 I
PITC_013310 Penicillium italicum PITC_013310 I
PMAA_023920 Penicillium marneffei PMAA_023920 I
PMAA_023920 Talaromyces marneffei PMAA_023920 I
POSPLDRAFT_43009 Postia placenta POSPLDRAFT_43009 I
PTRG_00091 Pyrenophora triticirepentis PTRG_00091 I
PTT_14738 Pyrenophora teres PTT_14738 I
PV05_10934 Exophiala xenobiotica PV05_10934 I
PV10_09015 Exophiala mesophila PV10_09015 I
RO3G_01462 Rhizopus oryzae RO3G_01462 I
RO3G_02095 Rhizopus oryzae RO3G_02095 I
SAPIO_CDS0213 Scedosporium apiospermum SAPIO_CDS0213 I
SBOR_2712 Sclerotinia borealis SBOR_2712 I
SEPMUDRAFT_145881 Sphaerulina musiva SEPMUDRAFT_145881 I
SETTUDRAFT_167089 Setosphaeria turcica SETTUDRAFT_167089 I
SNOG_11739 Stagonospora nodorum SNOG_11739 I
SNOG_11739 Phaeosphaeria nodorum SNOG_11739 I
TEQG_01042 Trichophyton equinum TEQG_01042 I
TESG_04572 Trichophyton tonsurans TESG_04572 I
TSTA_032350 Talaromyces stipitatus TSTA_032350 I
U727_0043393201 Penicillium solitum U727_0043393201 I
UCRNP2_6201 Neofusicoccum parvum UCRNP2_6201 I
UREG_07541 Uncinocarpus reesii UREG_07541 I
V499_08665 Pseudogymnoascus pannorum V499_08665 I
VHEMI02022 Torrubiella hemipterigena VHEMI02022 I
WALSEDRAFT_15215 Wallemia sebi WALSEDRAFT_15215 N