Bra017235 (Brassica rapa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bra017235 T001105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.768 0.922
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra017235.1-P AP2 13 65

Links

Other AP2 family TFs
Other Brassica rapa TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g052870 Brassica oleracea Bo1g052870 N
Bo8g047170 Brassica oleracea Bo8g047170 N
Bostr.30275s0178 Boechera stricta Bostr.30275s0178 N
Bra021063 Brassica rapa Bra021063 N
Cagra.3356s0014 Capsella grandiflora Cagra.3356s0014 N
Carubv10004566m.g Capsella rubella Carubv10004566m.g N
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N
SCL13 Arabidopsis thaliana AT4G17230 N
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N
Thhalv10024887m.g Eutrema salsugineum Thhalv10024887m.g N