Carubv10004566m.g (Capsella rubella)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Carubv10004566m.g T202342_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Carubv10004566m GRAS 155 525
Carubv10004596m GRAS 141 511

Links

Other GRAS family TFs
Other Capsella rubella TFs

13 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.3356s0014 Capsella grandiflora Cagra.3356s0014 N 0.997
Bostr.30275s0178 Boechera stricta Bostr.30275s0178 N 0.973
SCL13 Arabidopsis thaliana AT4G17230 N 0.957
Thhalv10024887m.g Eutrema salsugineum Thhalv10024887m.g N 0.932
Bo1g052870 Brassica oleracea Bo1g052870 N 0.908
Bra026237 Brassica rapa Bra026237 N 0.902
Bra021063 Brassica rapa Bra021063 N 0.900
Bo8g047170 Brassica oleracea Bo8g047170 N 0.894
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.756
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.716
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N 0.713
orange1.1g008984m.g Citrus sinensis orange1.1g008984m.g N 0.710