CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra026237
(
Brassica rapa
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Bra026237
T199995_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra026237.1-P
GRAS
158
528
LKEVLVEAAQAVAEGDFAAACGFIDVLEQMVSVSGTPIQRLGTYMAEGLRARLQGTGGNIYRALKCNEPTGRELMSYMGVLYEICPYWKFAYNAANAAILEAVAGEKRVHIIDFQIAQGTQYMFLINELAKLPGGPPLLRVTGVDDSQSRFARGGGLNLVGEKLANKAQSCGVPFEFHDAIMSGCKVHREHLGVEPGFAVVVNFPYVLHHMPDESVSVENHRDRLLRLIKSLGPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCAARDIVNMIACEERERVERHEVLGKWRVRMMMAGFMGWPVSSSAAFAASEMLKGYDKNYKLGENEGALYLFWKRRPMATCSAWK
Links
Other
GRAS
family TFs
Other
Brassica rapa
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo1g052870
Brassica oleracea
Bo1g052870
N
0.965
Thhalv10024887m.g
Eutrema salsugineum
Thhalv10024887m.g
N
0.913
Bra021063
Brassica rapa
Bra021063
N
0.911
SCL13
Arabidopsis lyrata
fgenesh2_kg.7__2586__AT4G17230.1
N
0.909
Bo8g047170
Brassica oleracea
Bo8g047170
N
0.905
Bostr.30275s0178
Boechera stricta
Bostr.30275s0178
N
0.905
Cagra.3356s0014
Capsella grandiflora
Cagra.3356s0014
N
0.902
Carubv10004566m.g
Capsella rubella
Carubv10004566m.g
N
0.902
SCL13
Arabidopsis thaliana
AT4G17230
N
0.894
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.705