CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
OGLUM08G23770
(
Oryza glumaepatula
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OGLUM08G23770
T003303_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM08G23770.1
AP2
43
96
PVFRGVRRRGRAGRWVCEVRVPGSRGDRLWVGTFDTAEEAARAHDAAMLALCGA
Links
Other
AP2
family TFs
Other
Oryza glumaepatula
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA026544
Oryza indica
BGIOSGA026544
N
0.848
BGIOSGA026545
Oryza indica
BGIOSGA026545
N
0.841
GRMZM2G124011
Zea mays
GRMZM2G124011
I
0.694
GRMZM2G175856
Zea mays
GRMZM2G175856
N
0.781
OPUNC09G15260
Oryza punctata
OPUNC09G15260
I
0.678
ORGLA08G0220100
Oryza glaberrima
ORGLA08G0220100
I
0.678
ORGLA08G0220200
Oryza glaberrima
ORGLA08G0220200
N
0.848
Pavir.Fa00114
Panicum virgatum
Pavir.Fa00114
N
0.775
Pavir.J32829
Panicum virgatum
Pavir.J32829
N
0.781
Sb07g025210
Sorghum bicolor
Sb07g025210
N
0.775