POPTR_0005s25470 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0005s25470 T004647_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.780 0.939
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.780 0.939
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.780 0.939
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.718 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.690 0.816
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.677 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0005s25470.1 AP2 42 93

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

124 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL013408 Aedes aegypti AAEL013408 I 0.000
AALB004583 Anopheles albimanus AALB004583 I 0.000
AARA003510 Anopheles arabiensis AARA003510 I 0.000
AATE015987 Anopheles atroparvus AATE015987 I 0.000
ACHR007416 Anopheles christyi ACHR007416 I 0.000
ACOM036369 Anopheles coluzzii ACOM036369 I 0.000
ACUA011008 Anopheles culicifacies ACUA011008 I 0.000
ADAC006957 Anopheles darlingi ADAC006957 I 0.000
ADIR001685 Anopheles dirus ADIR001685 I 0.000
AEPI005273 Anopheles epiroticus AEPI005273 I 0.000
AFAF013455 Anopheles farauti AFAF013455 I 0.000
AFUN005053 Anopheles funestus AFUN005053 I 0.000
AGAP004905 Anopheles gambiae AGAP004905 I 0.000
AMAM018568 Anopheles maculatus AMAM018568 I 0.000
AMEC000569 Anopheles melas AMEC000569 I 0.000
AMEM010249 Anopheles merus AMEM010249 I 0.000
AMIN011402 Anopheles minimus AMIN011402 I 0.000
AQUA000322 Anopheles quadriannulatus AQUA000322 I 0.000
ASIS014192 Anopheles sinensis ASIS014192 I 0.000
ASTEI10643 Anopheles stephensi ASTEI10643 I 0.000
CLEC001236 Cimex lectularius CLEC001236 I 0.000
CPIJ007045 Culex quinquefasciatus CPIJ007045 I 0.000
CpipJ_CPIJ007045 Culex pipiens CpipJ_CPIJ007045 I 0.000
Deaf1 Drosophila melanogaster FBgn0013799 D 0.000
GA21169 Drosophila pseudoobscura FBgn0081157 I 0.000
GD14830 Drosophila simulans FBgn0186503 I 0.000
GE19626 Drosophila yakuba FBgn0236964 I 0.000
GE23216 Drosophila yakuba FBgn0240415 I 0.000
GF23595 Drosophila ananassae FBgn0100589 I 0.000
GG16060 Drosophila erecta FBgn0108295 I 0.000
GH14660 Drosophila grimshawi FBgn0122136 I 0.000
GI11644 Drosophila mojavensis FBgn0134404 I 0.000
GJ11325 Drosophila virilis FBgn0198585 I 0.000
GK16969 Drosophila willistoni FBgn0218968 I 0.000
HHAL006904-PA Halyomorpha halys HHAL006904-PA I 0.000
HMEL013517 Heliconius melpomene HMEL013517 I 0.000
KGM_18605 Danaus plexippus KGM_18605 I 0.000
LCUP007674 Lucilia cuprina LCUP007674 I 0.000
LLOJ006782 Lutzomyia longipalpis LLOJ006782 I 0.000
MCINX013640 Melitaea cinxia MCINX013640 I 0.000
MDOA003373 Musca domestica MDOA003373 I 0.000
PPAI007052 Phlebotomus papatasi PPAI007052 I 0.000
RPRC001228 Rhodnius prolixus RPRC001228 I 0.000