scaffold_601912.1 (Arabidopsis lyrata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 scaffold_601912.1 T005105_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.807 1.000
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.724 0.816
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.724 0.816
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.724 0.816
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.704 0.796
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.695 0.796
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.682 0.776
DREB2F
M06630_2.00 		Arabidopsis thaliana
YCDCCRCCGCY
RGCGGYGGHGR		 Dap-seq
OMalley et al.(2016)
AT3G57600_col_a 		0.680 0.816
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
scaffold_601912.1 AP2 32 83

Links

Other AP2 family TFs
Other Arabidopsis lyrata TFs

209 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_01599 Capronia epimyces A1O3_01599 N
CFIO01_08941 Colletotrichum fioriniae CFIO01_08941 N
CGGC5_834 Colletotrichum gloeosporioides CGGC5_834 N
Cob_04241 Colletotrichum orbiculare Cob_04241 N
CSUB01_05236 Colletotrichum sublineola CSUB01_05236 N
GLRG_04974 Colletotrichum graminicola GLRG_04974 I
S40285_05512 Stachybotrys chlorohalonata S40285_05512 I
S40288_01495 Stachybotrys chartarum S40288_01495 I