CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Si036118m.g
(
Setaria italica
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Si036118m.g
T005373_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
P93392_TOBAC
M09731_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$OPBP1_01
0.689
0.755
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si036118m
AP2
170
221
AQYKGVRRRPWGKWAAEIRDPVKGVRVWLGTFPSAEAAALAYDAAARDIRGA
Links
Other
AP2
family TFs
Other
Setaria italica
TFs
152 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cagra.0463s0005
Capsella grandiflora
Cagra.0463s0005
N
Eucgr.F02843
Eucalyptus grandis
Eucgr.F02843
N
Eucgr.F02845
Eucalyptus grandis
Eucgr.F02845
N
gene26513-v1.0-hybrid
Fragaria vesca
gene26513-v1.0-hybrid
N
MDP0000127691
Malus domestica
MDP0000127691
N
MDP0000317257
Malus domestica
MDP0000317257
N
mgf022083m
Mimulus guttatus
mgf022083m
N
MYB114
Arabidopsis thaliana
AT1G66380
I
ORUFI03G21780
Oryza rufipogon
ORUFI03G21780
N
PGSC0003DMG400013965
Solanum tuberosum
PGSC0003DMG400013965
N
PGSC0003DMG400013966
Solanum tuberosum
PGSC0003DMG400013966
N
Pm029437
Prunus mume
Pm029437
N
Pm029444
Prunus mume
Pm029444
N
SapurV1A.0230s0230
Salix purpurea
SapurV1A.0230s0230
N
TRIUR3_10933
Triticum urartu
TRIUR3_10933
N
VIT_02s0033g00370
Vitis vinifera
VIT_02s0033g00370
N