CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Solyc04g049800.2
(
Solanum lycopersicum
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
Solyc04g049800.2
T005454_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc04g049800.2.1
AP2
111
160
SQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRG
Solyc04g049800.2.1
AP2
203
247
SKYRGVTLHKCGRWEGQFIGKKAYDKCDGREAVTNFVASTYEREK
Links
Other
AP2
family TFs
Other
Solanum lycopersicum
TFs
14 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA004852
Oryza indica
BGIOSGA004852
N
BGIOSGA017964
Oryza indica
BGIOSGA017964
N
BGIOSGA017965
Oryza indica
BGIOSGA017965
N
BRADI2G55797
Brachypodium distachyon
BRADI2G55797
N
F775_31610
Aegilops tauschii
F775_31610
N
GRMZM2G027914
Zea mays
GRMZM2G027914
N
GRMZM2G091201
Zea mays
GRMZM2G091201
N
GRMZM2G143640
Zea mays
GRMZM2G143640
N
LPERR01G32800
Leersia perrieri
LPERR01G32800
N
LPERR05G14380
Leersia perrieri
LPERR05G14380
N
OB05G25990
Oryza brachyantha
OB05G25990
N
OBART01G38220
Oryza barthii
OBART01G38220
N
OGLUM01G42400
Oryza glumaepatula
OGLUM01G42400
N
OGLUM05G19230
Oryza glumaepatula
OGLUM05G19230
N
OGLUM05G19240
Oryza glumaepatula
OGLUM05G19240
N
OMERI01G35110
Oryza meridionalis
OMERI01G35110
N
ONIVA01G42920
Oryza nivara
ONIVA01G42920
N
ONIVA05G19090
Oryza nivara
ONIVA05G19090
N
OPUNC01G36990
Oryza punctata
OPUNC01G36990
N
OPUNC05G16000
Oryza punctata
OPUNC05G16000
N
ORGLA01G0320500
Oryza glaberrima
ORGLA01G0320500
N
ORGLA05G0157700
Oryza glaberrima
ORGLA05G0157700
N
ORUFI01G41590
Oryza rufipogon
ORUFI01G41590
N
ORUFI05G19330
Oryza rufipogon
ORUFI05G19330
N
ORUFI05G19340
Oryza rufipogon
ORUFI05G19340
N
OS01G0863300
Oryza sativa
OS01G0863300
N
OS05G0442400
Oryza sativa
OS05G0442400
N
Pavir.Ea03744
Panicum virgatum
Pavir.Ea03744
N
Pavir.J02275
Panicum virgatum
Pavir.J02275
N
Pavir.J08778
Panicum virgatum
Pavir.J08778
N
Sb03g040730
Sorghum bicolor
Sb03g040730
N
Sb09g021770
Sorghum bicolor
Sb09g021770
N
Si003047m.g
Setaria italica
Si003047m.g
N
Si023363m.g
Setaria italica
Si023363m.g
N