Cla022803 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla022803 T006535_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.737 0.898
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.737 0.898
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.737 0.898
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.684 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla022803 AP2 12 63

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R004209 Calypte anna Aan_R004209 I
Aan_R011063 Calypte anna Aan_R011063 I
Afo_R012154 Aptenodytes forsteri Afo_R012154 I
Afo_R013359 Aptenodytes forsteri Afo_R013359 I
Brh_R001640 Buceros rhinoceros Brh_R001640 I
Cmyd_10017697 Chelonia mydas Cmyd_10017697 I
ENSAMEG00000008380 Ailuropoda melanoleuca ENSAMEG00000008380 I
ENSAMXG00000005897 Astyanax mexicanus ENSAMXG00000005897 I
ENSAPLG00000009708 Anas platyrhynchos ENSAPLG00000009708 I
ENSAPLG00000015442 Anas platyrhynchos ENSAPLG00000015442 I
ENSBTAP00000013193-D1 Bos grunniens ENSBTAP00000013193-D1 I
ENSCSAG00000003010 Chlorocebus sabaeus ENSCSAG00000003010 I
ENSFALG00000011727 Ficedula albicollis ENSFALG00000011727 I
ENSGMOG00000016692 Gadus morhua ENSGMOG00000016692 I
ENSLACG00000001546 Latimeria chalumnae ENSLACG00000001546 I
ENSLACG00000004013 Latimeria chalumnae ENSLACG00000004013 I
ENSLOCG00000010331 Lepisosteus oculatus ENSLOCG00000010331 I
ENSLOCG00000013738 Lepisosteus oculatus ENSLOCG00000013738 I
ENSMEUG00000003128 Macropus eugenii ENSMEUG00000003128 I
ENSMEUG00000011152 Macropus eugenii ENSMEUG00000011152 I
ENSMPUG00000011075 Mustela putorius furo ENSMPUG00000011075 I
ENSNLEG00000010848 Nomascus leucogenys ENSNLEG00000010848 I
ENSOARG00000007443 Ovis aries ENSOARG00000007443 I
ENSONIG00000015919 Oreochromis niloticus ENSONIG00000015919 I
ENSP00000377218 Macaca fascicularis ENSP00000377218 I
ENSPANG00000013763 Papio anubis ENSPANG00000013763 I
ENSPFOG00000006505 Poecilia formosa ENSPFOG00000006505 I
ENSPSIG00000010399 Pelodiscus sinensis ENSPSIG00000010399 I
ENSPSIG00000016830 Pelodiscus sinensis ENSPSIG00000016830 I
ENSSHAG00000002124 Sarcophilus harrisii ENSSHAG00000002124 I
ENSXMAG00000004071 Xiphophorus maculatus ENSXMAG00000004071 I
Gfo_R010481 Geospiza fortis Gfo_R010481 I
IRF1 Anolis carolinensis ENSACAG00000012699 I
IRF1 Gallus gallus ENSGALG00000006785 I
IRF1 Meleagris gallopavo ENSMGAG00000008932 I
IRF1 Taeniopygia guttata ENSTGUG00000001375 I
Irf2 Rattus norvegicus ENSRNOG00000009824 I
IRF2 Sus scrofa ENSSSCG00000015782 I
IRF2 Tursiops truncatus ENSTTRG00000009391 I
IRF2 Pteropus vampyrus ENSPVAG00000007078 I
IRF2 Taeniopygia guttata ENSTGUG00000006662 I
irf2 Takifugu rubripes ENSTRUG00000001842 I
IRF2 Gallus gallus ENSGALG00000010642 I
IRF2 Vicugna pacos ENSVPAG00000011297 I
irf2 Danio rerio ENSDARG00000040465 I
IRF2 Cavia porcellus ENSCPOG00000013097 I
IRF2 Callithrix jacchus ENSCJAG00000005731 I
IRF2 Choloepus hoffmanni ENSCHOG00000012067 I
IRF2 Canis familiaris ENSCAFG00000007761 I
IRF2 Bos taurus ENSBTAG00000010002 I
irf2 Xenopus tropicalis XB-GENE-942910 I
irf2 Oryzias latipes ENSORLG00000008574 I
IRF2 Gorilla gorilla ENSGGOG00000016559 I
irf2 Gasterosteus aculeatus ENSGACG00000018763 I
IRF2 Loxodonta africana ENSLAFG00000000088 I
IRF2 Homo sapiens ENSG00000168310 D
IRF2 Felis catus ENSFCAG00000030144 I
IRF2 Erinaceus europaeus ENSEEUG00000004690 I
IRF2 Equus caballus ENSECAG00000007508 I
IRF2 Meleagris gallopavo ENSMGAG00000006359 I
IRF2 Microcebus murinus ENSMICG00000015506 I
IRF2 Myotis lucifugus ENSMLUG00000014246 I
IRF2 Macaca mulatta ENSMMUG00000015087 I
IRF2 Monodelphis domestica ENSMODG00000004393 I
Irf2 Mus musculus ENSMUSG00000031627 D
IRF2 Oryctolagus cuniculus ENSOCUG00000009229 I
IRF2 Otolemur garnettii ENSOGAG00000010966 I
IRF2 Ochotona princeps ENSOPRG00000005398 I
IRF2 Pan troglodytes ENSPTRG00000016639 I
irf2.L Xenopus laevis XB-GENE-942916 I
irf2.S Xenopus laevis XB-GENE-17339545 I
irf2a Danio rerio ENSDARG00000007387 I
Myotis_brandtii_IRF2_10027054 Myotis brandtii Myotis_brandtii_IRF2_10027054 I
Ogr17358 Ophisaurus gracilis Ogr17358 I
Pvit_12337 Pogona vitticeps Pvit_12337 I
Pvit_14395 Pogona vitticeps Pvit_14395 I
Tal_R004238 Tyto alba Tal_R004238 I
Tal_R005926 Tyto alba Tal_R005926 I
txndc15 Danio rerio ENSDARG00000043249 I