cassava28944.valid.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava28944.valid.m1 T006873_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 1.000
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava28944.valid.m1 AP2 20 71

Links

Other AP2 family TFs
Other Manihot esculenta TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AARA001627 Anopheles arabiensis AARA001627 N 0.000
ACHR001725 Anopheles christyi ACHR001725 N 0.000
ACOM033704 Anopheles coluzzii ACOM033704 N 0.000
ACUA010735 Anopheles culicifacies ACUA010735 N 0.000
ADIR010069 Anopheles dirus ADIR010069 N 0.000
AEPI009471 Anopheles epiroticus AEPI009471 N 0.000
AFAF001150 Anopheles farauti AFAF001150 N 0.000
AFUN005126 Anopheles funestus AFUN005126 N 0.000
AMAM008473 Anopheles maculatus AMAM008473 N 0.000
AMEC020656 Anopheles melas AMEC020656 N 0.000
AMEM014506 Anopheles merus AMEM014506 N 0.000
AMIN002314 Anopheles minimus AMIN002314 N 0.000
AQUA011609 Anopheles quadriannulatus AQUA011609 N 0.000
ASTEI09971 Anopheles stephensi ASTEI09971 N 0.000