CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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IGS.gm_4_00240
(
Chlorella NC64A
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
IGS.gm_4_00240
T007317_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
IGS.gm_4_00240
AP2
186
231
SKYRGVHQTFPTRRWEAQFRCGRGQRAWVREEQAARAYDKMMLWCE
Links
Other
AP2
family TFs
Other
Chlorella NC64A
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh4_pg.C_scaffold_60000103
Volvox carteri
fgenesh4_pg.C_scaffold_60000103
N
0.722
Genemark1.2480_g
Coccomyxa subellipsoidea C169
Genemark1.2480_g
N
0.780
GG.C169_S04_00468
Chlorella vulgaris
GG.C169_S04_00468
N
0.780
OSTLU_17981
Ostreococcus lucimarinus
OSTLU_17981
N
0.704