CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Genemark1.2480_g
(
Coccomyxa subellipsoidea C169
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Genemark1.2480_g
T008455_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
61690
AP2
151
200
SKYRGVHQTFPTRRWEAQFRRNGKPTSLGCFDEEEQAARAYDKMMLWCEL
Links
Other
AP2
family TFs
Other
Coccomyxa subellipsoidea C169
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GG.C169_S04_00468
Chlorella vulgaris
GG.C169_S04_00468
N
0.912
fgenesh4_pg.C_scaffold_60000103
Volvox carteri
fgenesh4_pg.C_scaffold_60000103
N
0.854
OSTLU_17981
Ostreococcus lucimarinus
OSTLU_17981
N
0.836
EuGene.0100010448
Micromonas sp RCC299
EuGene.0100010448
N
0.801
IGS.gm_4_00240
Chlorella NC64A
IGS.gm_4_00240
N
0.780
EuGene.0000020196
Micromonas pusilla
EuGene.0000020196
N
0.777