Cagra.1192s0001 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.1192s0001 T007726_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 1.000
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.1192s0001.1.p AP2 37 88

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cagra.1085s0002 Capsella grandiflora Cagra.1085s0002 N 0.000
Carubv10001486m.g Capsella rubella Carubv10001486m.g N 0.000
Gorai.008G159000 Gossypium raimondii Gorai.008G159000 N 0.000
Gorai.009G337700 Gossypium raimondii Gorai.009G337700 N 0.000
mgf001568m Mimulus guttatus mgf001568m N 0.000
SELMODRAFT_77288 Selaginella moellendorffii SELMODRAFT_77288 N 0.000