Cagra.7053s0005 (Capsella grandiflora)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cagra.7053s0005 T007803_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.782 0.920
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.782 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.7053s0005.1.p AP2 56 107

Links

Other AP2 family TFs
Other Capsella grandiflora TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP14860 Atta cephalotes ACEP14860 N 0.000
AMEM007577 Anopheles merus AMEM007577 N 0.000
ASIM_0001177701 Anisakis simplex ASIM_0001177701 N 0.000
A_08344 Schistosoma haematobium A_08344 N 0.000
EEL_0001074901 Elaeophora elaphi EEL_0001074901 N 0.000
GD16667 Drosophila simulans FBgn0188257 N 0.000
GL14769 Drosophila persimilis FBgn0152373 N 0.000
GPUH_0000809301 Gongylonema pulchrum GPUH_0000809301 N 0.000
L892_g7302 Steinernema scapterisci L892_g7302 N 0.000
L898_g7817 Steinernema monticolum L898_g7817 N 0.000
LOAG_15212 Loa loa LOAG_15212 N 0.000
MYT1L Callithrix jacchus ENSCJAG00000007286 N 0.000
nAv.1.0.1.g03526 Acanthocheilonema viteae nAv.1.0.1.g03526 N 0.000
nOo.2.0.1.g06132 Onchocerca ochengi nOo.2.0.1.g06132 N 0.000
Ocbimv22011176m.g Octopus bimaculoides Ocbimv22011176m.g N 0.000
OESDEN_08744 Oesophagostomum dentatum OESDEN_08744 N 0.000
Ogr10463 Ophisaurus gracilis Ogr10463 N 0.000
PEQ_0000073901 Parascaris equorum PEQ_0000073901 N 0.000
RPRC011887 Rhodnius prolixus RPRC011887 N 0.000
Sjc_0121660 Schistosoma japonicum Sjc_0121660 N 0.000
SNAPOd2T00028278001 Oikopleura dioica SNAPOd2T00028278001 N 0.000
TsM_000155300 Taenia solium TsM_000155300 N 0.000
YQE_11979 Dendroctonus ponderosae YQE_11979 N 0.000