Ciclev10022244m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10022244m.g T008025_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.710 0.816
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.705 0.878
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.705 0.878
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.705 0.878
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10022244m AP2 39 90

Links

Other AP2 family TFs
Other Citrus clementina TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSCSAG00000019619 Chlorocebus sabaeus ENSCSAG00000019619 N
ENSNLEG00000018866 Nomascus leucogenys ENSNLEG00000018866 N
ENSPANG00000023873 Papio anubis ENSPANG00000023873 N
ENSPPYG00000010038 Pongo abelii ENSPPYG00000010038 N
ENSSTOG00000019390 Ictidomys tridecemlineatus ENSSTOG00000019390 N
Zfp526 Rattus norvegicus ENSRNOG00000047526 N
Zfp526 Mus musculus ENSMUSG00000046541 N
ZNF526 Otolemur garnettii ENSOGAG00000031877 N
ZNF526 Tursiops truncatus ENSTTRG00000008336 N
ZNF526 Sus scrofa ENSSSCG00000028054 N
ZNF526 Pan troglodytes ENSPTRG00000011048 N
ZNF526 Ochotona princeps ENSOPRG00000010847 N
ZNF526 Bos taurus ENSBTAG00000020754 N
ZNF526 Homo sapiens ENSG00000167625 N
ZNF526 Echinops telfairi ENSETEG00000017049 N
ZNF526 Callithrix jacchus ENSCJAG00000012788 N
ZNF526 Canis familiaris ENSCAFG00000004891 N