gene01985-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene01985-v1.0-hybrid T008353_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.753 0.898
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.703 0.837
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna01985.1-v1.0-hybrid AP2 65 116

Links

Other AP2 family TFs
Other Fragaria vesca TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI2G08810 Brachypodium distachyon BRADI2G08810 N
EF517601.1_FG010 Zea mays EF517601.1_FG010 N
F775_00318 Aegilops tauschii F775_00318 N
GSMUA_Achr10G02050_001 Musa acuminata GSMUA_Achr10G02050_001 N
GSMUA_Achr8G22220_001 Musa acuminata GSMUA_Achr8G22220_001 N
OMERI01G09440 Oryza meridionalis OMERI01G09440 N
ONIVA11G16880 Oryza nivara ONIVA11G16880 N
OPUNC01G09340 Oryza punctata OPUNC01G09340 N
ORGLA01G0085600 Oryza glaberrima ORGLA01G0085600 N
ORUFI01G10280 Oryza rufipogon ORUFI01G10280 N
Pavir.Ea00827 Panicum virgatum Pavir.Ea00827 N
Sb03g005180 Sorghum bicolor Sb03g005180 N
Sb03g009480 Sorghum bicolor Sb03g009480 N
Si005179m.g Setaria italica Si005179m.g N