gene21003-v1.0-hybrid (Fragaria vesca)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gene21003-v1.0-hybrid T008415_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.793 0.920
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.793 0.920
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna21003.1-v1.0-hybrid AP2 57 108

Links

Other AP2 family TFs
Other Fragaria vesca TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo1g052870 Brassica oleracea Bo1g052870 N 0.000
Bo8g047170 Brassica oleracea Bo8g047170 N 0.000
Bostr.30275s0178 Boechera stricta Bostr.30275s0178 N 0.000
Bra021063 Brassica rapa Bra021063 N 0.000
Cagra.3356s0014 Capsella grandiflora Cagra.3356s0014 N 0.000
Carubv10004566m.g Capsella rubella Carubv10004566m.g N 0.000
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.000
SCL13 Arabidopsis thaliana AT4G17230 N 0.000
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.000
Thhalv10024887m.g Eutrema salsugineum Thhalv10024887m.g N 0.000