Gorai.003G162700 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.003G162700 T008509_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.691 0.820
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.691 0.820
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G162700.1 AP2 39 90

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EuGene.0400010690 Micromonas sp RCC299 EuGene.0400010690 N
fgenesh1_pg.C_scaffold_4000063 Micromonas pusilla fgenesh1_pg.C_scaffold_4000063 N
OSTLU_27423 Ostreococcus lucimarinus OSTLU_27423 N
OSTLU_27497 Ostreococcus lucimarinus OSTLU_27497 N