CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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EuGene.0400010690
(
Micromonas sp RCC299
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
EuGene.0400010690
T016099_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
58161
ARID/BRIGHT
13
167
EFLADLVRTRCPRSILHPPARPDASRPRSHAAVSIFQRRPALPAIRAENHAPPTPVQISFLQAKGRFKLAPEGCDPESFPRRTLNGFKLDLFGLYRAVCVRGGFPRADRKKSDAPKLNWTRDVFTRLANHTDTHKATSVGHDLITHYQNYLAEYE
Links
Other
ARID/BRIGHT
family TFs
Other
Micromonas sp RCC299
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pg.C_scaffold_4000063
Micromonas pusilla
fgenesh1_pg.C_scaffold_4000063
N
0.644
OSTLU_27423
Ostreococcus lucimarinus
OSTLU_27423
N
0.520
OSTLU_27497
Ostreococcus lucimarinus
OSTLU_27497
N
0.520
EuGene.1400010189
Ostreococcus RCC809
EuGene.1400010189
N
0.520
estExt_fgenesh5_synt.C_400033
Volvox carteri
estExt_fgenesh5_synt.C_400033
N
0.427