Gorai.006G013600 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.006G013600 T008555_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.796 0.863
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.796 0.863
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G013600.1 AP2 42 93

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

269 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001230 Aedes aegypti AAEL001230 N
AARA002561 Anopheles arabiensis AARA002561 N
ACHR008455 Anopheles christyi ACHR008455 N
ACUA023712 Anopheles culicifacies ACUA023712 N
ADIR004650 Anopheles dirus ADIR004650 N
AFUN000252 Anopheles funestus AFUN000252 N
AGAP000875 Anopheles gambiae AGAP000875 N
AMEC011182 Anopheles melas AMEC011182 N
AMIN005800 Anopheles minimus AMIN005800 N
AQUA002448 Anopheles quadriannulatus AQUA002448 N
ASIS023610 Anopheles sinensis ASIS023610 N
ASTEI01189 Anopheles stephensi ASTEI01189 N
BGIBMGA006961 Bombyx mori BGIBMGA006961 N
BGLB002715 Biomphalaria glabrata BGLB002715 N
CG43689 Drosophila melanogaster FBgn0263772 I
Cmyd_10017545 Chelonia mydas Cmyd_10017545 N
DAPPUDRAFT_241731 Daphnia pulex DAPPUDRAFT_241731 N
EFV52052 Trichinella spiralis EFV52052 N
ENSPMAG00000002519 Petromyzon marinus ENSPMAG00000002519 N
ENSXMAG00000007322 Xiphophorus maculatus ENSXMAG00000007322 N
GA24131 Drosophila pseudoobscura FBgn0245530 N
GE16325 Drosophila yakuba FBgn0233857 N
GF20773 Drosophila ananassae FBgn0097779 N
GH24141 Drosophila grimshawi FBgn0131597 N
GJ17015 Drosophila virilis FBgn0204192 N
GK10260 Drosophila willistoni FBgn0212275 N
GM12320 Drosophila sechellia FBgn0167257 N
MDOA006645 Musca domestica MDOA006645 N
MYT1L Choloepus hoffmanni ENSCHOG00000002551 N
nRc.2.0.1.g46521 Romanomermis culicivorax nRc.2.0.1.g46521 N
Ogr11018 Ophisaurus gracilis Ogr11018 N
ST18 Sorex araneus ENSSARG00000014015 N
TC004325 Tribolium castaneum TC004325 N