Gorai.009G244500 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.009G244500 T008654_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF014
M06581_2.00 		Arabidopsis thaliana
YCDYCDCCACCGHCD
HGDCGGTGGHGRHGR		 Dap-seq
OMalley et al.(2016)
AT1G44830_col_a 		0.796 1.000
ERF012
M06570_2.00 		Arabidopsis thaliana
NHNNHNHHDHHDCCACCGHC
GDCGGTGGHDDHDDNDNNDN		 Dap-seq
OMalley et al.(2016)
DREB26_col_a 		0.782 0.960
ERF013
M06601_2.00 		Arabidopsis thaliana
DYCACCGHCAHHDNHNNNNNN
NNNNNNDNHDDTGDCGGTGRH		 Dap-seq
OMalley et al.(2016)
At1g77640_col_a 		0.763 0.960
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.009G244500.1 AP2 38 89

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

127 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ASIM_0001204901 Anisakis simplex ASIM_0001204901 N 0.000
ASU_02713 Ascaris suum ASU_02713 N 0.000
Bm3681 Brugia malayi Bm3681 N 0.000
CBG10736 Caenorhabditis briggsae CBG10736 N 0.000
CBN24068 Caenorhabditis brenneri CBN24068 N 0.000
CBN31083 Caenorhabditis brenneri CBN31083 N 0.000
CJA12606 Caenorhabditis japonica CJA12606 N 0.000
CRE10982 Caenorhabditis remanei CRE10982 N 0.000
D918_03480 Trichuris suis D918_03480 N 0.000
EFV59106 Trichinella spiralis EFV59106 N 0.000
ENSAMXG00000012742 Astyanax mexicanus ENSAMXG00000012742 N 0.000
EVEC_0000655901 Enterobius vermicularis EVEC_0000655901 N 0.000
HCOI00581300 Haemonchus contortus HCOI00581300 N 0.000
HHAL001339-PA Halyomorpha halys HHAL001339-PA N 0.000
HPLM_0000501901 Haemonchus placei HPLM_0000501901 N 0.000
L596_g23719 Steinernema carpocapsae L596_g23719 N 0.000
L892_g21703 Steinernema scapterisci L892_g21703 N 0.000
LOAG_17507 Loa loa LOAG_17507 N 0.000
nAv.1.0.1.g02082 Acanthocheilonema viteae nAv.1.0.1.g02082 N 0.000
nRc.2.0.1.g22459 Romanomermis culicivorax nRc.2.0.1.g22459 N 0.000
SBAD_0000454101 Soboliphyme baturini SBAD_0000454101 N 0.000
SINV25541 Solenopsis invicta SINV25541 N 0.000
SMUV_0000904801 Syphacia muris SMUV_0000904801 N 0.000
SPAL_0000385600 Strongyloides papillosus SPAL_0000385600 N 0.000
SVE_1904900 Strongyloides venezuelensis SVE_1904900 N 0.000
Tal_R007044 Tyto alba Tal_R007044 I 0.000
TTRE_0000009201 Trichuris trichiura TTRE_0000009201 N 0.000
WBGene00241636 Onchocerca volvulus WBGene00241636 N 0.000
YQE_02569 Dendroctonus ponderosae YQE_02569 N 0.000
ZEB2 Tupaia belangeri ENSTBEG00000013983 I 0.000