Lus10012226.g (Linum usitatissimum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Lus10012226.g T008785_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.723 0.755
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.711 0.736
Q8H769_WHEAT
M09721_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1_01 		0.709 0.755
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.704 0.717
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.704 0.717
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.704 0.717
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.684 0.717
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10012226 AP2 62 121

Links

Other AP2 family TFs
Other Linum usitatissimum TFs

204 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACLA_045730 Aspergillus clavatus CADACLAG00004722 N
ACRE_023510 Acremonium chrysogenum ACRE_023510 N
ANIA_10548 Aspergillus nidulans CADANIAG00006108 N
AUEXF2481DRAFT_34307 Aureobasidium subglaciale AUEXF2481DRAFT_34307 N
BAUCODRAFT_69220 Baudoinia compniacensis BAUCODRAFT_69220 N
BBA_06148 Beauveria bassiana BBA_06148 N
Bcin09g00170 Botrytis cinerea Bcin09g00170 N
CADAFLAG00005085 Aspergillus flavus CADAFLAG00005085 N
CFIO01_11865 Colletotrichum fioriniae CFIO01_11865 N
CH063_11448 Colletotrichum higginsianum CH063_11448 N
CHGG_07031 Chaetomium globosum CHGG_07031 N
Cob_09598 Colletotrichum orbiculare Cob_09598 N
COCC4DRAFT_201237 Bipolaris maydis COCC4DRAFT_201237 N
COCCADRAFT_30369 Bipolaris zeicola COCCADRAFT_30369 N
COCMIDRAFT_100081 Bipolaris oryzae COCMIDRAFT_100081 N
COCSADRAFT_193461 Bipolaris sorokiniana COCSADRAFT_193461 N
COCVIDRAFT_107172 Bipolaris victoriae COCVIDRAFT_107172 N
DRE_06414 Drechslerella stenobrocha DRE_06414 N
e_gw1.5.1073.1 Nectria haematococca e_gw1.5.1073.1 N
e_gw1.7.43.1 Cryphonectria parasitica e_gw1.7.43.1 N
FFUJ_07420 Fusarium fujikuroi FFUJ_07420 N
GGTG_00276 Gaeumannomyces graminis GGTG_00276 N
gw1.1.946.1 Neurospora discreta gw1.1.946.1 N
H072_3652 Dactylellina haptotyla H072_3652 N
LEMA_P045160.1 Leptosphaeria maculans LEMA_P045160.1 N
M437DRAFT_55629 Aureobasidium melanogenum M437DRAFT_55629 N
M438DRAFT_284105 Aureobasidium pullulans M438DRAFT_284105 N
MAC_00769 Metarhizium acridum MAC_00769 N
MAJ_06853 Metarhizium majus MAJ_06853 N
MAPG_11028 Magnaporthe poae MAPG_11028 N
MGG_15085 Magnaporthe oryzae MGG_15085 N
MYCTH_46266 Myceliophthora thermophila MYCTH_46266 N
NCU04295 Neurospora crassa NCU04295 N
NechaG41859 Fusarium solani NechaG41859 N
OIDMADRAFT_190476 Oidiodendron maius OIDMADRAFT_190476 N
Pc22g17270 Penicillium chrysogenum Pc22g17270 N
PCH_Pc22g17270 Penicillium rubens PCH_Pc22g17270 N
PDE_06088 Penicillium oxalicum PDE_06088 N
PEX1_010730 Penicillium expansum PEX1_010730 N
PFICI_13123 Pestalotiopsis fici PFICI_13123 N
PITC_070290 Penicillium italicum PITC_070290 N
PTT_18362 Pyrenophora teres PTT_18362 N
PV09_03879 Verruconis gallopava PV09_03879 N
S40288_02744 Stachybotrys chartarum S40288_02744 N
SEPMUDRAFT_152064 Sphaerulina musiva SEPMUDRAFT_152064 N
SETTUDRAFT_134587 Setosphaeria turcica SETTUDRAFT_134587 N
THITE_2108982 Thielavia terrestris THITE_2108982 N
TRIATDRAFT_243762 Trichoderma atroviride TRIATDRAFT_243762 N
TSTA_071060 Talaromyces stipitatus TSTA_071060 N
U727_0043424091 Penicillium solitum U727_0043424091 N
UCRNP2_5763 Neofusicoccum parvum UCRNP2_5763 N
VDAG_00066 Verticillium dahliae VDAG_00066 N
VDBG_00456 Verticillium alfalfae VDBG_00456 N
VDBG_00456 Verticillium albo atrum VDBG_00456 N
VHEMI08735 Torrubiella hemipterigena VHEMI08735 N
X797_008350 Metarhizium robertsii X797_008350 N