orange1.1g036655m.g (Citrus sinensis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 orange1.1g036655m.g T009259_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.784 0.939
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.784 0.939
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.784 0.939
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.726 0.837
PK07402.1
M01097_2.00 		Cannabis sativa
NVRCCGMCH
DGKCGGYBN		 PBM
Lambert et al.(2019)
pTH11436 		0.694 0.816
PK08602.1
M01098_2.00 		Cannabis sativa
NYCACCGCYN
NRGCGGTGRN		 PBM
Lambert et al.(2019)
pTH11421 		0.684 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g036655m AP2 34 85

Links

Other AP2 family TFs
Other Citrus sinensis TFs

142 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007349 Ailuropoda melanoleuca ENSAMEG00000007349 N
ENSCSAG00000001613 Chlorocebus sabaeus ENSCSAG00000001613 N
ENSDORG00000009776 Dipodomys ordii ENSDORG00000009776 N
ENSMPUG00000008423 Mustela putorius furo ENSMPUG00000008423 N
ENSNLEG00000011055 Nomascus leucogenys ENSNLEG00000011055 N
ENSP00000343617 Macaca fascicularis ENSP00000343617 N
ENSPANG00000010429 Papio anubis ENSPANG00000010429 N
ENSPCAG00000000009 Procavia capensis ENSPCAG00000000009 N
ENSPPYG00000010488 Pongo abelii ENSPPYG00000010488 N
ENSSTOG00000025545 Ictidomys tridecemlineatus ENSSTOG00000025545 N
Zfp606 Rattus norvegicus ENSRNOG00000019127 N
Zfp606 Mus musculus ENSMUSG00000030386 N
ZNF606 Otolemur garnettii ENSOGAG00000009299 N
ZNF606 Bos taurus ENSBTAG00000003456 N
ZNF606 Tursiops truncatus ENSTTRG00000017225 N
ZNF606 Sus scrofa ENSSSCG00000003995 N
ZNF606 Pan troglodytes ENSPTRG00000011575 N
ZNF606 Callithrix jacchus ENSCJAG00000000374 N
ZNF606 Canis familiaris ENSCAFG00000029776 N
ZNF606 Choloepus hoffmanni ENSCHOG00000005074 N
ZNF606 Loxodonta africana ENSLAFG00000008695 N
ZNF606 Gorilla gorilla ENSGGOG00000010665 N
ZNF606 Homo sapiens ENSG00000166704 N
ZNF606 Echinops telfairi ENSETEG00000014446 N
ZNF606 Equus caballus ENSECAG00000001316 N