Thhalv10017537m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10017537m.g T009954_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF024
M01614_2.00 		Arabidopsis thaliana
NNRCCGHCN
NGDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8206 		0.786 0.961
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10017537m AP2 13 65

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

10 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g030140 Brassica oleracea Bo3g030140 I 0.713
Bo4g034600 Brassica oleracea Bo4g034600 I 0.773
Bo4g186300 Brassica oleracea Bo4g186300 I 0.804
Bostr.23794s0446 Boechera stricta Bostr.23794s0446 I 0.773
Bra017235 Brassica rapa Bra017235 I 0.808
Bra023070 Brassica rapa Bra023070 I 0.713
Cagra.0228s0035 Capsella grandiflora Cagra.0228s0035 I 0.808
Carubv10024954m.g Capsella rubella Carubv10024954m.g I 0.808
ERF024 Arabidopsis thaliana AT2G36450 D 0.786
HRD Arabidopsis lyrata scaffold_402264.1 I 0.778