chr1.CM0195.510.nd (Lotus japonicus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 chr1.CM0195.510.nd T010140_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB2D
M01611_2.00 		Arabidopsis thaliana
NNRCCGHNN
NNDCGGYNN		 PBM
Weirauch et al.(2014)
pTH8108 		0.732 0.898
DREB2D
M06597_2.00 		Arabidopsis thaliana
YHNYYDCCRCCGYYD
HRRCGGYGGHRRNDR		 Dap-seq
OMalley et al.(2016)
At1g75490_col_a 		0.732 0.898
DREB2D
M06598_2.00 		Arabidopsis thaliana
HNNHDYCACCGHYWN
NWRDCGGTGRHDNND		 Dap-seq
OMalley et al.(2016)
At1g75490_colamp_a 		0.732 0.898
DREB2G
M06662_2.00 		Arabidopsis thaliana
DCCRCCGCYDYHDYH
DRHDRHRGCGGYGGH		 Dap-seq
OMalley et al.(2016)
At5g18450_col_a 		0.686 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0195.510.nd AP2 33 84

Links

Other AP2 family TFs
Other Lotus japonicus TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O3_08818 Capronia epimyces A1O3_08818 N
ACLA_074230 Aspergillus clavatus CADACLAG00006381 N
AFUA_2G15260 Aspergillus fumigatus CADAFUAG00004604 N
AUEXF2481DRAFT_234640 Aureobasidium subglaciale AUEXF2481DRAFT_234640 N
AUEXF2481DRAFT_701448 Aureobasidium subglaciale AUEXF2481DRAFT_701448 N
CADANGAG00007889 Aspergillus niger CADANGAG00007889 N
EURHEDRAFT_417585 Aspergillus ruber EURHEDRAFT_417585 N
G647_01486 Cladophialophora carrionii G647_01486 N
H072_136 Dactylellina haptotyla H072_136 N
JL09_g1719 Pichia kudriavzevii JL09_g1719 N
M437DRAFT_60050 Aureobasidium melanogenum M437DRAFT_60050 N
M438DRAFT_363806 Aureobasidium pullulans M438DRAFT_363806 N
PMAA_001790 Penicillium marneffei PMAA_001790 N
PMAA_001790 Talaromyces marneffei PMAA_001790 N
PV04_00541 Capronia semiimmersa PV04_00541 N
PV05_06583 Exophiala xenobiotica PV05_06583 N
PV05_09876 Exophiala xenobiotica PV05_09876 N
PV06_00861 Exophiala oligosperma PV06_00861 N
PV06_05578 Exophiala oligosperma PV06_05578 N
PV07_06253 Cladophialophora immunda PV07_06253 N
PV08_00876 Exophiala spinifera PV08_00876 N
PV10_01954 Exophiala mesophila PV10_01954 N
TSTA_099190 Talaromyces stipitatus TSTA_099190 N
Z518_04980 Rhinocladiella mackenziei Z518_04980 N
Z519_02061 Cladophialophora bantiana Z519_02061 N